Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 KRT18P56-201ENST00000507275 550 ntBASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.88■□□□□ 0.29
NIPAL1Q6NVV3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 AC108860.2-201ENST00000562760 2183 ntBASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 FAM220CP-201ENST00000395253 831 ntBASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 KRT16P4-201ENST00000453883 522 ntBASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 PRELID1P1-202ENST00000567272 903 ntBASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 AC005336.2-201ENST00000593183 939 ntBASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 LINC01711-201ENST00000598340 967 ntBASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 KRT8P47-201ENST00000604727 1398 ntBASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL1Q6NVV3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NIPAL1Q6NVV3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NIPAL1Q6NVV3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NIPAL1Q6NVV3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NIPAL1Q6NVV3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NIPAL1Q6NVV3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NIPAL1Q6NVV3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
NIPAL1Q6NVV3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NIPAL1Q6NVV3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms