Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 AC009053.2-201ENST00000563701 2365 ntBASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 AC009949.1-201ENST00000623048 1830 ntBASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 AKR1C7P-201ENST00000305623 895 ntBASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 ABCD1P5-201ENST00000445663 754 ntBASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 AC132008.2-207ENST00000454517 770 ntBASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 EMBP1-201ENST00000458200 901 ntBASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 AC106795.1-205ENST00000512851 1056 ntBASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.22■□□□□ 0.51
TTC39BQ5VTQ0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TTC39BQ5VTQ0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TTC39BQ5VTQ0 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TTC39BQ5VTQ0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.21■□□□□ 0.51
TTC39BQ5VTQ0 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.21■□□□□ 0.51
TTC39BQ5VTQ0 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TTC39BQ5VTQ0 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TTC39BQ5VTQ0 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TTC39BQ5VTQ0 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.21■□□□□ 0.51
TTC39BQ5VTQ0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TTC39BQ5VTQ0 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TTC39BQ5VTQ0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.21■□□□□ 0.51
TTC39BQ5VTQ0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.21■□□□□ 0.51
TTC39BQ5VTQ0 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.21■□□□□ 0.51
TTC39BQ5VTQ0 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TTC39BQ5VTQ0 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TTC39BQ5VTQ0 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TTC39BQ5VTQ0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TTC39BQ5VTQ0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TTC39BQ5VTQ0 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.21■□□□□ 0.51
TTC39BQ5VTQ0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TTC39BQ5VTQ0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TTC39BQ5VTQ0 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.5
TTC39BQ5VTQ0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TTC39BQ5VTQ0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.2■□□□□ 0.5
TTC39BQ5VTQ0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.2■□□□□ 0.5
TTC39BQ5VTQ0 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TTC39BQ5VTQ0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TTC39BQ5VTQ0 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
TTC39BQ5VTQ0 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TTC39BQ5VTQ0 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TTC39BQ5VTQ0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TTC39BQ5VTQ0 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
TTC39BQ5VTQ0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TTC39BQ5VTQ0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TTC39BQ5VTQ0 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TTC39BQ5VTQ0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TTC39BQ5VTQ0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.2■□□□□ 0.5
TTC39BQ5VTQ0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TTC39BQ5VTQ0 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TTC39BQ5VTQ0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.2■□□□□ 0.5
TTC39BQ5VTQ0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.2■□□□□ 0.5
TTC39BQ5VTQ0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.2■□□□□ 0.5
TTC39BQ5VTQ0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TTC39BQ5VTQ0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.2■□□□□ 0.5
TTC39BQ5VTQ0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TTC39BQ5VTQ0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TTC39BQ5VTQ0 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TTC39BQ5VTQ0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.2■□□□□ 0.5
TTC39BQ5VTQ0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TTC39BQ5VTQ0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TTC39BQ5VTQ0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
TTC39BQ5VTQ0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TTC39BQ5VTQ0 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
TTC39BQ5VTQ0 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.19■□□□□ 0.5
TTC39BQ5VTQ0 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms