Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 AC073314.1-201ENST00000568729 2216 ntBASIC18.77■□□□□ 0.59
PRPF38BQ5VTL8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PRPF38BQ5VTL8 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PRPF38BQ5VTL8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 AC093004.1-201ENST00000508850 424 ntBASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 AL118558.3-201ENST00000607414 1079 ntBASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 AC015967.2-201ENST00000624092 234 ntBASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 AC006435.4-201ENST00000625037 234 ntBASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 AL356737.1-201ENST00000634391 234 ntBASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.76■□□□□ 0.59
PRPF38BQ5VTL8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRPF38BQ5VTL8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRPF38BQ5VTL8 AL023806.1-201ENST00000603994 1649 ntBASIC18.75■□□□□ 0.59
PRPF38BQ5VTL8 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRPF38BQ5VTL8 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRPF38BQ5VTL8 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRPF38BQ5VTL8 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.75■□□□□ 0.59
PRPF38BQ5VTL8 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.75■□□□□ 0.59
PRPF38BQ5VTL8 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRPF38BQ5VTL8 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.75■□□□□ 0.59
PRPF38BQ5VTL8 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.75■□□□□ 0.59
PRPF38BQ5VTL8 MIR4722-201ENST00000578292 60 ntBASIC18.75■□□□□ 0.59
PRPF38BQ5VTL8 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.75■□□□□ 0.59
PRPF38BQ5VTL8 AC004840.1-201ENST00000636359 365 ntBASIC18.75■□□□□ 0.59
PRPF38BQ5VTL8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
PRPF38BQ5VTL8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.75■□□□□ 0.59
PRPF38BQ5VTL8 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRPF38BQ5VTL8 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRPF38BQ5VTL8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRPF38BQ5VTL8 AC087499.5-201ENST00000452760 1342 ntBASIC18.74■□□□□ 0.59
PRPF38BQ5VTL8 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRPF38BQ5VTL8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.74■□□□□ 0.59
PRPF38BQ5VTL8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRPF38BQ5VTL8 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRPF38BQ5VTL8 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRPF38BQ5VTL8 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PRPF38BQ5VTL8 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRPF38BQ5VTL8 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.74■□□□□ 0.59
PRPF38BQ5VTL8 AC007389.4-201ENST00000454674 793 ntBASIC18.74■□□□□ 0.59
PRPF38BQ5VTL8 PFN1P12-201ENST00000455938 534 ntBASIC18.74■□□□□ 0.59
PRPF38BQ5VTL8 CROCCP4-201ENST00000457096 498 ntBASIC18.74■□□□□ 0.59
PRPF38BQ5VTL8 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PRPF38BQ5VTL8 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.74■□□□□ 0.59
PRPF38BQ5VTL8 EMC4-209ENST00000559421 497 ntTSL 2 BASIC18.74■□□□□ 0.59
PRPF38BQ5VTL8 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRPF38BQ5VTL8 AP000842.3-202ENST00000569238 1080 ntBASIC18.74■□□□□ 0.59
PRPF38BQ5VTL8 AC016629.1-201ENST00000596579 586 ntBASIC18.74■□□□□ 0.59
PRPF38BQ5VTL8 AC243960.2-201ENST00000600996 747 ntBASIC18.74■□□□□ 0.59
PRPF38BQ5VTL8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRPF38BQ5VTL8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRPF38BQ5VTL8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PRPF38BQ5VTL8 IRX1P1-201ENST00000438849 1838 ntBASIC18.74■□□□□ 0.59
PRPF38BQ5VTL8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.74■□□□□ 0.59
PRPF38BQ5VTL8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRPF38BQ5VTL8 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRPF38BQ5VTL8 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRPF38BQ5VTL8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRPF38BQ5VTL8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRPF38BQ5VTL8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
PRPF38BQ5VTL8 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRPF38BQ5VTL8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRPF38BQ5VTL8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
PRPF38BQ5VTL8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.73■□□□□ 0.59
PRPF38BQ5VTL8 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRPF38BQ5VTL8 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms