Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC11.61□□□□□ -0.55
VPS13DQ5THJ4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13DQ5THJ4 AC026120.1-201ENST00000611536 926 ntBASIC11.61□□□□□ -0.55
VPS13DQ5THJ4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13DQ5THJ4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13DQ5THJ4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13DQ5THJ4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13DQ5THJ4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC11.61□□□□□ -0.55
VPS13DQ5THJ4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC11.61□□□□□ -0.55
VPS13DQ5THJ4 SLC25A24-204ENST00000569674 2357 ntBASIC11.61□□□□□ -0.55
VPS13DQ5THJ4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
VPS13DQ5THJ4 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC11.61□□□□□ -0.55
VPS13DQ5THJ4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 BASP1P1-201ENST00000430708 665 ntBASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 AC087163.2-201ENST00000457299 853 ntBASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 AC046185.3-201ENST00000623228 1824 ntBASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 DUX4L17-201ENST00000557360 1267 ntBASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 ARSEP1-201ENST00000420443 635 ntBASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 KLF2P3-201ENST00000451977 1087 ntBASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
VPS13DQ5THJ4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 AC104581.1-202ENST00000635932 2618 ntBASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 CNN2P2-201ENST00000443536 909 ntBASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 FAM86GP-201ENST00000448322 971 ntBASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 CNN2P3-201ENST00000450201 906 ntBASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 NOP2-220ENST00000545915 630 ntTSL 2 BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 AL136317.3-201ENST00000618497 906 ntBASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC11.59□□□□□ -0.55
VPS13DQ5THJ4 RNA5SP421-201ENST00000516864 134 ntBASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms