Protein–RNA interactions for Protein: Q587I9

SFT2D3, Vesicle transport protein SFT2C, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D3Q587I9 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SFT2D3Q587I9 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SFT2D3Q587I9 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.12■□□□□ 0.33
SFT2D3Q587I9 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SFT2D3Q587I9 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SFT2D3Q587I9 BX276092.5-203ENST00000456199 560 ntBASIC17.12■□□□□ 0.33
SFT2D3Q587I9 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SFT2D3Q587I9 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.12■□□□□ 0.33
SFT2D3Q587I9 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.12■□□□□ 0.33
SFT2D3Q587I9 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.12■□□□□ 0.33
SFT2D3Q587I9 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.12■□□□□ 0.33
SFT2D3Q587I9 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SFT2D3Q587I9 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.12■□□□□ 0.33
SFT2D3Q587I9 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.12■□□□□ 0.33
SFT2D3Q587I9 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SFT2D3Q587I9 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
SFT2D3Q587I9 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.12■□□□□ 0.33
SFT2D3Q587I9 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SFT2D3Q587I9 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.12■□□□□ 0.33
SFT2D3Q587I9 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SFT2D3Q587I9 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.12■□□□□ 0.33
SFT2D3Q587I9 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SFT2D3Q587I9 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SFT2D3Q587I9 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SFT2D3Q587I9 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.12■□□□□ 0.33
SFT2D3Q587I9 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SFT2D3Q587I9 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.12■□□□□ 0.33
SFT2D3Q587I9 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 TSPY22P-201ENST00000427496 604 ntBASIC17.11■□□□□ 0.33
SFT2D3Q587I9 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 AL121672.3-201ENST00000608644 468 ntBASIC17.11■□□□□ 0.33
SFT2D3Q587I9 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.11■□□□□ 0.33
SFT2D3Q587I9 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.11■□□□□ 0.33
SFT2D3Q587I9 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SFT2D3Q587I9 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SFT2D3Q587I9 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SFT2D3Q587I9 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.1■□□□□ 0.33
SFT2D3Q587I9 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SFT2D3Q587I9 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
SFT2D3Q587I9 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.1■□□□□ 0.33
SFT2D3Q587I9 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.1■□□□□ 0.33
SFT2D3Q587I9 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SFT2D3Q587I9 SDHAP2-201ENST00000455183 2001 ntBASIC17.1■□□□□ 0.33
SFT2D3Q587I9 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SFT2D3Q587I9 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.1■□□□□ 0.33
SFT2D3Q587I9 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SFT2D3Q587I9 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SFT2D3Q587I9 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SFT2D3Q587I9 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SFT2D3Q587I9 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SFT2D3Q587I9 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.1■□□□□ 0.33
SFT2D3Q587I9 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
SFT2D3Q587I9 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.1■□□□□ 0.33
SFT2D3Q587I9 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.1■□□□□ 0.33
SFT2D3Q587I9 KRT8P26-201ENST00000534154 1276 ntBASIC17.1■□□□□ 0.33
SFT2D3Q587I9 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
SFT2D3Q587I9 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.1■□□□□ 0.33
SFT2D3Q587I9 AC005332.3-201ENST00000589904 676 ntBASIC17.1■□□□□ 0.33
SFT2D3Q587I9 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.1■□□□□ 0.33
SFT2D3Q587I9 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SFT2D3Q587I9 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.1■□□□□ 0.33
SFT2D3Q587I9 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SFT2D3Q587I9 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SFT2D3Q587I9 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms