Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KHDC1Q4VXA5 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KHDC1Q4VXA5 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
KHDC1Q4VXA5 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.72■□□□□ 0.43
KHDC1Q4VXA5 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
KHDC1Q4VXA5 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
KHDC1Q4VXA5 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.72■□□□□ 0.43
KHDC1Q4VXA5 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KHDC1Q4VXA5 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KHDC1Q4VXA5 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KHDC1Q4VXA5 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
KHDC1Q4VXA5 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KHDC1Q4VXA5 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
KHDC1Q4VXA5 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
KHDC1Q4VXA5 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.72■□□□□ 0.43
KHDC1Q4VXA5 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.72■□□□□ 0.43
KHDC1Q4VXA5 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.72■□□□□ 0.43
KHDC1Q4VXA5 AC011840.4-201ENST00000578471 627 ntBASIC17.72■□□□□ 0.43
KHDC1Q4VXA5 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.72■□□□□ 0.43
KHDC1Q4VXA5 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
KHDC1Q4VXA5 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KHDC1Q4VXA5 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.72■□□□□ 0.43
KHDC1Q4VXA5 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KHDC1Q4VXA5 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.72■□□□□ 0.43
KHDC1Q4VXA5 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.72■□□□□ 0.43
KHDC1Q4VXA5 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
KHDC1Q4VXA5 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KHDC1Q4VXA5 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KHDC1Q4VXA5 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.72■□□□□ 0.43
KHDC1Q4VXA5 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
KHDC1Q4VXA5 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
KHDC1Q4VXA5 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
KHDC1Q4VXA5 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KHDC1Q4VXA5 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KHDC1Q4VXA5 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KHDC1Q4VXA5 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KHDC1Q4VXA5 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KHDC1Q4VXA5 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.71■□□□□ 0.43
KHDC1Q4VXA5 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
KHDC1Q4VXA5 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KHDC1Q4VXA5 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KHDC1Q4VXA5 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.71■□□□□ 0.43
KHDC1Q4VXA5 IGHV3-47-201ENST00000425060 335 ntBASIC17.71■□□□□ 0.43
KHDC1Q4VXA5 KRT17P6-201ENST00000453795 1220 ntBASIC17.71■□□□□ 0.43
KHDC1Q4VXA5 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.71■□□□□ 0.43
KHDC1Q4VXA5 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.71■□□□□ 0.43
KHDC1Q4VXA5 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.71■□□□□ 0.43
KHDC1Q4VXA5 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
KHDC1Q4VXA5 CLEC4GP1-201ENST00000596555 870 ntBASIC17.71■□□□□ 0.43
KHDC1Q4VXA5 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KHDC1Q4VXA5 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
KHDC1Q4VXA5 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
KHDC1Q4VXA5 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
KHDC1Q4VXA5 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.71■□□□□ 0.43
KHDC1Q4VXA5 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.71■□□□□ 0.43
KHDC1Q4VXA5 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KHDC1Q4VXA5 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.71■□□□□ 0.43
KHDC1Q4VXA5 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
KHDC1Q4VXA5 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
KHDC1Q4VXA5 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
KHDC1Q4VXA5 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.71■□□□□ 0.42
KHDC1Q4VXA5 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
KHDC1Q4VXA5 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.71■□□□□ 0.42
KHDC1Q4VXA5 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 AC246785.2-201ENST00000432512 513 ntBASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 AC074051.2-201ENST00000565115 352 ntBASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms