Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 GUSBP12-201ENST00000513727 720 ntBASIC19.88■□□□□ 0.77
LONRF3Q496Y0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.88■□□□□ 0.77
LONRF3Q496Y0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LONRF3Q496Y0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
LONRF3Q496Y0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.88■□□□□ 0.77
LONRF3Q496Y0 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LONRF3Q496Y0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.88■□□□□ 0.77
LONRF3Q496Y0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
LONRF3Q496Y0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.88■□□□□ 0.77
LONRF3Q496Y0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LONRF3Q496Y0 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LONRF3Q496Y0 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LONRF3Q496Y0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.88■□□□□ 0.77
LONRF3Q496Y0 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
LONRF3Q496Y0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LONRF3Q496Y0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LONRF3Q496Y0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.87■□□□□ 0.77
LONRF3Q496Y0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LONRF3Q496Y0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
LONRF3Q496Y0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LONRF3Q496Y0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LONRF3Q496Y0 BCL2-203ENST00000589955 5011 ntBASIC19.87■□□□□ 0.77
LONRF3Q496Y0 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LONRF3Q496Y0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LONRF3Q496Y0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.87■□□□□ 0.77
LONRF3Q496Y0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LONRF3Q496Y0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
LONRF3Q496Y0 AC004870.1-201ENST00000315132 882 ntBASIC19.87■□□□□ 0.77
LONRF3Q496Y0 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
LONRF3Q496Y0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.87■□□□□ 0.77
LONRF3Q496Y0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LONRF3Q496Y0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.87■□□□□ 0.77
LONRF3Q496Y0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.87■□□□□ 0.77
LONRF3Q496Y0 AP005901.3-202ENST00000581653 237 ntBASIC19.87■□□□□ 0.77
LONRF3Q496Y0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LONRF3Q496Y0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LONRF3Q496Y0 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.87■□□□□ 0.77
LONRF3Q496Y0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LONRF3Q496Y0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LONRF3Q496Y0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LONRF3Q496Y0 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LONRF3Q496Y0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LONRF3Q496Y0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LONRF3Q496Y0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LONRF3Q496Y0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.87■□□□□ 0.77
LONRF3Q496Y0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LONRF3Q496Y0 AC010460.3-201ENST00000511359 1579 ntBASIC19.87■□□□□ 0.77
LONRF3Q496Y0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LONRF3Q496Y0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LONRF3Q496Y0 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LONRF3Q496Y0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
LONRF3Q496Y0 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.86■□□□□ 0.77
LONRF3Q496Y0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LONRF3Q496Y0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
LONRF3Q496Y0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LONRF3Q496Y0 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LONRF3Q496Y0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LONRF3Q496Y0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.86■□□□□ 0.77
LONRF3Q496Y0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.86■□□□□ 0.77
LONRF3Q496Y0 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LONRF3Q496Y0 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.86■□□□□ 0.77
LONRF3Q496Y0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
LONRF3Q496Y0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.86■□□□□ 0.77
LONRF3Q496Y0 KRT17P6-201ENST00000453795 1220 ntBASIC19.86■□□□□ 0.77
LONRF3Q496Y0 KRT18P31-201ENST00000506277 1292 ntBASIC19.86■□□□□ 0.77
LONRF3Q496Y0 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.86■□□□□ 0.77
LONRF3Q496Y0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.86■□□□□ 0.77
LONRF3Q496Y0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.86■□□□□ 0.77
LONRF3Q496Y0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LONRF3Q496Y0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LONRF3Q496Y0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LONRF3Q496Y0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LONRF3Q496Y0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
LONRF3Q496Y0 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LONRF3Q496Y0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LONRF3Q496Y0 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LONRF3Q496Y0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LONRF3Q496Y0 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
LONRF3Q496Y0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LONRF3Q496Y0 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LONRF3Q496Y0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LONRF3Q496Y0 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LONRF3Q496Y0 NKILA-202ENST00000614771 2598 ntBASIC19.85■□□□□ 0.77
LONRF3Q496Y0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LONRF3Q496Y0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LONRF3Q496Y0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LONRF3Q496Y0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
LONRF3Q496Y0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
LONRF3Q496Y0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LONRF3Q496Y0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.85■□□□□ 0.77
LONRF3Q496Y0 RN7SL606P-201ENST00000472779 293 ntBASIC19.85■□□□□ 0.77
LONRF3Q496Y0 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.85■□□□□ 0.77
LONRF3Q496Y0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.85■□□□□ 0.77
LONRF3Q496Y0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LONRF3Q496Y0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LONRF3Q496Y0 AL121772.3-201ENST00000610840 674 ntBASIC19.85■□□□□ 0.77
LONRF3Q496Y0 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LONRF3Q496Y0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
LONRF3Q496Y0 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.85■□□□□ 0.77
LONRF3Q496Y0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms