Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SREBF2Q12772 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SREBF2Q12772 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SREBF2Q12772 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
SREBF2Q12772 AC093677.2-201ENST00000600169 1863 ntBASIC19.82■□□□□ 0.76
SREBF2Q12772 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SREBF2Q12772 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SREBF2Q12772 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SREBF2Q12772 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.82■□□□□ 0.76
SREBF2Q12772 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.82■□□□□ 0.76
SREBF2Q12772 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.82■□□□□ 0.76
SREBF2Q12772 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.82■□□□□ 0.76
SREBF2Q12772 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SREBF2Q12772 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SREBF2Q12772 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SREBF2Q12772 AFG3L1P-217ENST00000557444 2447 ntBASIC19.82■□□□□ 0.76
SREBF2Q12772 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SREBF2Q12772 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SREBF2Q12772 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.82■□□□□ 0.76
SREBF2Q12772 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SREBF2Q12772 GNAS-203ENST00000306120 1878 ntBASIC19.82■□□□□ 0.76
SREBF2Q12772 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.82■□□□□ 0.76
SREBF2Q12772 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SREBF2Q12772 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SREBF2Q12772 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SREBF2Q12772 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SREBF2Q12772 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.81■□□□□ 0.76
SREBF2Q12772 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SREBF2Q12772 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.81■□□□□ 0.76
SREBF2Q12772 HMGA1P7-201ENST00000406908 502 ntBASIC19.81■□□□□ 0.76
SREBF2Q12772 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.81■□□□□ 0.76
SREBF2Q12772 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.81■□□□□ 0.76
SREBF2Q12772 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.81■□□□□ 0.76
SREBF2Q12772 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC19.81■□□□□ 0.76
SREBF2Q12772 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.81■□□□□ 0.76
SREBF2Q12772 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SREBF2Q12772 AC073592.8-201ENST00000624126 511 ntBASIC19.81■□□□□ 0.76
SREBF2Q12772 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.81■□□□□ 0.76
SREBF2Q12772 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.81■□□□□ 0.76
SREBF2Q12772 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SREBF2Q12772 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
SREBF2Q12772 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SREBF2Q12772 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.81■□□□□ 0.76
SREBF2Q12772 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.81■□□□□ 0.76
SREBF2Q12772 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.81■□□□□ 0.76
SREBF2Q12772 AC046185.3-201ENST00000623228 1824 ntBASIC19.81■□□□□ 0.76
SREBF2Q12772 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.81■□□□□ 0.76
SREBF2Q12772 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.81■□□□□ 0.76
SREBF2Q12772 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.81■□□□□ 0.76
SREBF2Q12772 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SREBF2Q12772 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.8■□□□□ 0.76
SREBF2Q12772 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SREBF2Q12772 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SREBF2Q12772 AC100757.3-201ENST00000622361 1406 ntBASIC19.8■□□□□ 0.76
SREBF2Q12772 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SREBF2Q12772 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SREBF2Q12772 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SREBF2Q12772 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.8■□□□□ 0.76
SREBF2Q12772 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SREBF2Q12772 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SREBF2Q12772 AC027369.6-201ENST00000525520 931 ntBASIC19.8■□□□□ 0.76
SREBF2Q12772 AC109635.5-201ENST00000533593 962 ntBASIC19.8■□□□□ 0.76
SREBF2Q12772 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19.8■□□□□ 0.76
SREBF2Q12772 AC005412.3-201ENST00000580309 715 ntBASIC19.8■□□□□ 0.76
SREBF2Q12772 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC19.8■□□□□ 0.76
SREBF2Q12772 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SREBF2Q12772 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
SREBF2Q12772 AC073592.3-201ENST00000625118 1834 ntBASIC19.8■□□□□ 0.76
SREBF2Q12772 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SREBF2Q12772 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SREBF2Q12772 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SREBF2Q12772 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SREBF2Q12772 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.8■□□□□ 0.76
SREBF2Q12772 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SREBF2Q12772 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SREBF2Q12772 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SREBF2Q12772 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.79■□□□□ 0.76
SREBF2Q12772 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SREBF2Q12772 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.79■□□□□ 0.76
SREBF2Q12772 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.79■□□□□ 0.76
SREBF2Q12772 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SREBF2Q12772 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SREBF2Q12772 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
SREBF2Q12772 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.79■□□□□ 0.76
SREBF2Q12772 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.79■□□□□ 0.76
SREBF2Q12772 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SREBF2Q12772 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SREBF2Q12772 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
SREBF2Q12772 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SREBF2Q12772 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SREBF2Q12772 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC19.79■□□□□ 0.76
SREBF2Q12772 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SREBF2Q12772 IGHV3-71-201ENST00000523324 359 ntBASIC19.79■□□□□ 0.76
SREBF2Q12772 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC19.79■□□□□ 0.76
SREBF2Q12772 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.79■□□□□ 0.76
SREBF2Q12772 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
SREBF2Q12772 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
SREBF2Q12772 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SREBF2Q12772 AC008267.7-201ENST00000624570 1194 ntBASIC19.79■□□□□ 0.76
SREBF2Q12772 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms