Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CFHR3Q02985 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CFHR3Q02985 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CFHR3Q02985 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CFHR3Q02985 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC13.65□□□□□ -0.22
CFHR3Q02985 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CFHR3Q02985 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CFHR3Q02985 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CFHR3Q02985 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CFHR3Q02985 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CFHR3Q02985 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CFHR3Q02985 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CFHR3Q02985 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CFHR3Q02985 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CFHR3Q02985 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CFHR3Q02985 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CFHR3Q02985 LAGE3P1-201ENST00000425356 484 ntBASIC13.65□□□□□ -0.22
CFHR3Q02985 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CFHR3Q02985 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.65□□□□□ -0.22
CFHR3Q02985 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.65□□□□□ -0.22
CFHR3Q02985 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.65□□□□□ -0.22
CFHR3Q02985 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CFHR3Q02985 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.65□□□□□ -0.22
CFHR3Q02985 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.65□□□□□ -0.22
CFHR3Q02985 TK1-204ENST00000590430 683 ntTSL 3 BASIC13.65□□□□□ -0.22
CFHR3Q02985 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.65□□□□□ -0.22
CFHR3Q02985 AC004817.3-201ENST00000602957 2129 ntBASIC13.65□□□□□ -0.22
CFHR3Q02985 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CFHR3Q02985 MIR7706-201ENST00000613747 67 ntBASIC13.65□□□□□ -0.22
CFHR3Q02985 AC107918.4-202ENST00000641623 219 ntBASIC13.65□□□□□ -0.22
CFHR3Q02985 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CFHR3Q02985 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC13.65□□□□□ -0.22
CFHR3Q02985 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.65□□□□□ -0.22
CFHR3Q02985 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CFHR3Q02985 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.65□□□□□ -0.22
CFHR3Q02985 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CFHR3Q02985 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CFHR3Q02985 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CFHR3Q02985 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CFHR3Q02985 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CFHR3Q02985 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
CFHR3Q02985 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.64□□□□□ -0.23
CFHR3Q02985 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CFHR3Q02985 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.64□□□□□ -0.23
CFHR3Q02985 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CFHR3Q02985 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC13.64□□□□□ -0.23
CFHR3Q02985 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC13.64□□□□□ -0.23
CFHR3Q02985 AC134043.2-201ENST00000624206 2238 ntBASIC13.64□□□□□ -0.23
CFHR3Q02985 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CFHR3Q02985 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
CFHR3Q02985 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CFHR3Q02985 CROCCP1-201ENST00000426910 5675 ntBASIC13.64□□□□□ -0.23
CFHR3Q02985 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.64□□□□□ -0.23
CFHR3Q02985 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CFHR3Q02985 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CFHR3Q02985 AC007613.1-201ENST00000572811 2597 ntBASIC13.64□□□□□ -0.23
CFHR3Q02985 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.64□□□□□ -0.23
CFHR3Q02985 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CFHR3Q02985 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CFHR3Q02985 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
CFHR3Q02985 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CFHR3Q02985 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CFHR3Q02985 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.64□□□□□ -0.23
CFHR3Q02985 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.64□□□□□ -0.23
CFHR3Q02985 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CFHR3Q02985 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CFHR3Q02985 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.64□□□□□ -0.23
CFHR3Q02985 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CFHR3Q02985 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.64□□□□□ -0.23
CFHR3Q02985 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.64□□□□□ -0.23
CFHR3Q02985 RPS2P1-201ENST00000434010 821 ntBASIC13.64□□□□□ -0.23
CFHR3Q02985 S100A2-206ENST00000497140 697 ntTSL 2 BASIC13.64□□□□□ -0.23
CFHR3Q02985 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.64□□□□□ -0.23
CFHR3Q02985 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.64□□□□□ -0.23
CFHR3Q02985 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.64□□□□□ -0.23
CFHR3Q02985 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.64□□□□□ -0.23
CFHR3Q02985 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.64□□□□□ -0.23
CFHR3Q02985 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.64□□□□□ -0.23
CFHR3Q02985 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CFHR3Q02985 AP001005.1-201ENST00000571755 1248 ntBASIC13.64□□□□□ -0.23
CFHR3Q02985 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.64□□□□□ -0.23
CFHR3Q02985 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.64□□□□□ -0.23
CFHR3Q02985 AL589182.2-201ENST00000619332 1049 ntBASIC13.64□□□□□ -0.23
CFHR3Q02985 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CFHR3Q02985 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC13.64□□□□□ -0.23
CFHR3Q02985 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CFHR3Q02985 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CFHR3Q02985 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CFHR3Q02985 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CFHR3Q02985 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CFHR3Q02985 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CFHR3Q02985 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CFHR3Q02985 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CFHR3Q02985 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC13.64□□□□□ -0.23
CFHR3Q02985 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.64□□□□□ -0.23
CFHR3Q02985 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC13.63□□□□□ -0.23
CFHR3Q02985 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CFHR3Q02985 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CFHR3Q02985 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
CFHR3Q02985 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms