Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 NOC2LP2-201ENST00000407594 1944 ntBASIC15.42■□□□□ 0.06
NKX6-1P78426 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
NKX6-1P78426 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NKX6-1P78426 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
NKX6-1P78426 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NKX6-1P78426 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.42■□□□□ 0.06
NKX6-1P78426 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.42■□□□□ 0.06
NKX6-1P78426 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NKX6-1P78426 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NKX6-1P78426 AC125634.1-201ENST00000438758 1403 ntBASIC15.42■□□□□ 0.06
NKX6-1P78426 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NKX6-1P78426 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NKX6-1P78426 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NKX6-1P78426 AC022898.2-201ENST00000616822 1312 ntBASIC15.42■□□□□ 0.06
NKX6-1P78426 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.41■□□□□ 0.06
NKX6-1P78426 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NKX6-1P78426 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.41■□□□□ 0.06
NKX6-1P78426 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NKX6-1P78426 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NKX6-1P78426 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NKX6-1P78426 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.41■□□□□ 0.06
NKX6-1P78426 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NKX6-1P78426 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NKX6-1P78426 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.41■□□□□ 0.06
NKX6-1P78426 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NKX6-1P78426 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.41■□□□□ 0.06
NKX6-1P78426 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.41■□□□□ 0.06
NKX6-1P78426 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.41■□□□□ 0.06
NKX6-1P78426 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.41■□□□□ 0.06
NKX6-1P78426 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.41■□□□□ 0.06
NKX6-1P78426 MTDHP3-201ENST00000594186 672 ntBASIC15.41■□□□□ 0.06
NKX6-1P78426 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NKX6-1P78426 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
NKX6-1P78426 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NKX6-1P78426 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
NKX6-1P78426 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NKX6-1P78426 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
NKX6-1P78426 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
NKX6-1P78426 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.41■□□□□ 0.06
NKX6-1P78426 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.41■□□□□ 0.06
NKX6-1P78426 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
NKX6-1P78426 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.41■□□□□ 0.06
NKX6-1P78426 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NKX6-1P78426 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NKX6-1P78426 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NKX6-1P78426 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NKX6-1P78426 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NKX6-1P78426 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
NKX6-1P78426 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
NKX6-1P78426 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NKX6-1P78426 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NKX6-1P78426 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NKX6-1P78426 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NKX6-1P78426 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.4■□□□□ 0.06
NKX6-1P78426 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
NKX6-1P78426 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NKX6-1P78426 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
NKX6-1P78426 RBM17P3-201ENST00000417687 1192 ntBASIC15.4■□□□□ 0.06
NKX6-1P78426 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.4■□□□□ 0.06
NKX6-1P78426 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.4■□□□□ 0.06
NKX6-1P78426 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
NKX6-1P78426 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.4■□□□□ 0.06
NKX6-1P78426 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.4■□□□□ 0.06
NKX6-1P78426 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.4■□□□□ 0.06
NKX6-1P78426 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.4■□□□□ 0.06
NKX6-1P78426 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.4■□□□□ 0.06
NKX6-1P78426 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NKX6-1P78426 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NKX6-1P78426 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NKX6-1P78426 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
NKX6-1P78426 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NKX6-1P78426 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.4■□□□□ 0.06
NKX6-1P78426 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NKX6-1P78426 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NKX6-1P78426 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NKX6-1P78426 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.4■□□□□ 0.06
NKX6-1P78426 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.4■□□□□ 0.06
NKX6-1P78426 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NKX6-1P78426 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NKX6-1P78426 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
NKX6-1P78426 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NKX6-1P78426 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NKX6-1P78426 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.4■□□□□ 0.06
NKX6-1P78426 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NKX6-1P78426 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NKX6-1P78426 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NKX6-1P78426 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NKX6-1P78426 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NKX6-1P78426 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NKX6-1P78426 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NKX6-1P78426 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX6-1P78426 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
NKX6-1P78426 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX6-1P78426 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX6-1P78426 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
NKX6-1P78426 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.39■□□□□ 0.05
NKX6-1P78426 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NKX6-1P78426 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX6-1P78426 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX6-1P78426 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms