Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCNA1P78396 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCNA1P78396 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.74■□□□□ 0.75
CCNA1P78396 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.74■□□□□ 0.75
CCNA1P78396 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.74■□□□□ 0.75
CCNA1P78396 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.74■□□□□ 0.75
CCNA1P78396 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.74■□□□□ 0.75
CCNA1P78396 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCNA1P78396 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCNA1P78396 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.74■□□□□ 0.75
CCNA1P78396 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCNA1P78396 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.74■□□□□ 0.75
CCNA1P78396 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.74■□□□□ 0.75
CCNA1P78396 FAM86C2P-203ENST00000528684 1004 ntBASIC19.74■□□□□ 0.75
CCNA1P78396 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.74■□□□□ 0.75
CCNA1P78396 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.74■□□□□ 0.75
CCNA1P78396 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCNA1P78396 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCNA1P78396 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.74■□□□□ 0.75
CCNA1P78396 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCNA1P78396 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCNA1P78396 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.74■□□□□ 0.75
CCNA1P78396 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCNA1P78396 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCNA1P78396 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CCNA1P78396 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCNA1P78396 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCNA1P78396 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CCNA1P78396 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.73■□□□□ 0.75
CCNA1P78396 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCNA1P78396 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCNA1P78396 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCNA1P78396 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.73■□□□□ 0.75
CCNA1P78396 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.73■□□□□ 0.75
CCNA1P78396 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCNA1P78396 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCNA1P78396 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCNA1P78396 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.73■□□□□ 0.75
CCNA1P78396 FAM86GP-201ENST00000448322 971 ntBASIC19.73■□□□□ 0.75
CCNA1P78396 AC087163.2-201ENST00000457299 853 ntBASIC19.73■□□□□ 0.75
CCNA1P78396 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CCNA1P78396 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.73■□□□□ 0.75
CCNA1P78396 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.73■□□□□ 0.75
CCNA1P78396 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.73■□□□□ 0.75
CCNA1P78396 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.73■□□□□ 0.75
CCNA1P78396 AL645728.2-201ENST00000641974 660 ntBASIC19.73■□□□□ 0.75
CCNA1P78396 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCNA1P78396 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCNA1P78396 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCNA1P78396 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.73■□□□□ 0.75
CCNA1P78396 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCNA1P78396 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCNA1P78396 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
CCNA1P78396 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.73■□□□□ 0.75
CCNA1P78396 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.73■□□□□ 0.75
CCNA1P78396 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.72■□□□□ 0.75
CCNA1P78396 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.72■□□□□ 0.75
CCNA1P78396 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.72■□□□□ 0.75
CCNA1P78396 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCNA1P78396 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCNA1P78396 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCNA1P78396 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCNA1P78396 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CCNA1P78396 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCNA1P78396 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCNA1P78396 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCNA1P78396 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.72■□□□□ 0.75
CCNA1P78396 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCNA1P78396 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCNA1P78396 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.72■□□□□ 0.75
CCNA1P78396 TIMM8BP1-201ENST00000452384 211 ntBASIC19.72■□□□□ 0.75
CCNA1P78396 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCNA1P78396 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.72■□□□□ 0.75
CCNA1P78396 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCNA1P78396 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.72■□□□□ 0.75
CCNA1P78396 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CCNA1P78396 AC026120.1-201ENST00000611536 926 ntBASIC19.72■□□□□ 0.75
CCNA1P78396 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CCNA1P78396 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.72■□□□□ 0.75
CCNA1P78396 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.72■□□□□ 0.75
CCNA1P78396 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCNA1P78396 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCNA1P78396 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCNA1P78396 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CCNA1P78396 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
CCNA1P78396 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCNA1P78396 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCNA1P78396 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
CCNA1P78396 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.71■□□□□ 0.75
CCNA1P78396 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCNA1P78396 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CCNA1P78396 AP000974.1-201ENST00000623909 2387 ntBASIC19.71■□□□□ 0.75
CCNA1P78396 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.71■□□□□ 0.75
CCNA1P78396 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.71■□□□□ 0.75
CCNA1P78396 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCNA1P78396 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CCNA1P78396 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCNA1P78396 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CCNA1P78396 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCNA1P78396 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms