Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC12.8□□□□□ -0.36
APOC4P55056 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
APOC4P55056 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC4P55056 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC12.8□□□□□ -0.36
APOC4P55056 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC12.8□□□□□ -0.36
APOC4P55056 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC4P55056 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC4P55056 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC12.8□□□□□ -0.36
APOC4P55056 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
APOC4P55056 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC4P55056 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
APOC4P55056 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
APOC4P55056 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC4P55056 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC4P55056 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
APOC4P55056 AC005104.2-201ENST00000427818 678 ntBASIC12.8□□□□□ -0.36
APOC4P55056 SLC25A6P5-201ENST00000435663 894 ntBASIC12.8□□□□□ -0.36
APOC4P55056 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
APOC4P55056 RPL13AP23-201ENST00000480739 586 ntBASIC12.8□□□□□ -0.36
APOC4P55056 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
APOC4P55056 KRT18P58-201ENST00000527480 1120 ntBASIC12.8□□□□□ -0.36
APOC4P55056 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC12.8□□□□□ -0.36
APOC4P55056 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC12.8□□□□□ -0.36
APOC4P55056 PAM16-208ENST00000573553 722 ntTSL 2 BASIC12.8□□□□□ -0.36
APOC4P55056 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.8□□□□□ -0.36
APOC4P55056 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC12.8□□□□□ -0.36
APOC4P55056 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
APOC4P55056 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC12.8□□□□□ -0.36
APOC4P55056 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC4P55056 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
APOC4P55056 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC4P55056 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
APOC4P55056 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC4P55056 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
APOC4P55056 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC4P55056 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC4P55056 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC4P55056 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC4P55056 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC12.8□□□□□ -0.36
APOC4P55056 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC4P55056 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC12.79□□□□□ -0.36
APOC4P55056 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOC4P55056 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC4P55056 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC4P55056 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC4P55056 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
APOC4P55056 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC4P55056 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
APOC4P55056 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
APOC4P55056 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC4P55056 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
APOC4P55056 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC4P55056 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOC4P55056 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC4P55056 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
APOC4P55056 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC4P55056 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
APOC4P55056 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
APOC4P55056 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOC4P55056 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC12.79□□□□□ -0.36
APOC4P55056 AC098831.1-202ENST00000438821 336 ntBASIC12.79□□□□□ -0.36
APOC4P55056 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC12.79□□□□□ -0.36
APOC4P55056 AC136632.2-201ENST00000512891 861 ntBASIC12.79□□□□□ -0.36
APOC4P55056 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.79□□□□□ -0.36
APOC4P55056 ETFA-208ENST00000559602 792 ntTSL 3 BASIC12.79□□□□□ -0.36
APOC4P55056 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.79□□□□□ -0.36
APOC4P55056 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.79□□□□□ -0.36
APOC4P55056 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.79□□□□□ -0.36
APOC4P55056 AL049840.3-201ENST00000602669 611 ntBASIC12.79□□□□□ -0.36
APOC4P55056 AL356488.2-201ENST00000602755 427 ntBASIC12.79□□□□□ -0.36
APOC4P55056 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC12.79□□□□□ -0.36
APOC4P55056 AC117500.6-201ENST00000624871 588 ntBASIC12.79□□□□□ -0.36
APOC4P55056 AF228730.7-201ENST00000641842 219 ntBASIC12.79□□□□□ -0.36
APOC4P55056 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC4P55056 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC4P55056 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC4P55056 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC4P55056 COMP-202ENST00000425807 2292 ntTSL 2 BASIC12.79□□□□□ -0.36
APOC4P55056 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
APOC4P55056 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
APOC4P55056 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
APOC4P55056 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC4P55056 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC12.79□□□□□ -0.36
APOC4P55056 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC4P55056 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC4P55056 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC4P55056 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOC4P55056 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC12.79□□□□□ -0.36
APOC4P55056 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC12.79□□□□□ -0.36
APOC4P55056 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC4P55056 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC4P55056 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOC4P55056 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC12.79□□□□□ -0.36
APOC4P55056 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC4P55056 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC12.78□□□□□ -0.36
APOC4P55056 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
APOC4P55056 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
APOC4P55056 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
APOC4P55056 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
APOC4P55056 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms