Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.67■□□□□ 0.58
RAD23BP54727 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAD23BP54727 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAD23BP54727 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.67■□□□□ 0.58
RAD23BP54727 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAD23BP54727 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAD23BP54727 AKR1C7P-201ENST00000305623 895 ntBASIC18.67■□□□□ 0.58
RAD23BP54727 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAD23BP54727 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAD23BP54727 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAD23BP54727 MYCLP1-201ENST00000372451 1075 ntBASIC18.67■□□□□ 0.58
RAD23BP54727 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
RAD23BP54727 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAD23BP54727 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.67■□□□□ 0.58
RAD23BP54727 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.67■□□□□ 0.58
RAD23BP54727 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAD23BP54727 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAD23BP54727 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAD23BP54727 AC073592.5-201ENST00000624854 528 ntBASIC18.67■□□□□ 0.58
RAD23BP54727 TNRC18P3-201ENST00000441896 2691 ntBASIC18.67■□□□□ 0.58
RAD23BP54727 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RAD23BP54727 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAD23BP54727 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAD23BP54727 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAD23BP54727 AL138688.1-201ENST00000624851 1594 ntBASIC18.67■□□□□ 0.58
RAD23BP54727 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.67■□□□□ 0.58
RAD23BP54727 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
RAD23BP54727 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAD23BP54727 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.67■□□□□ 0.58
RAD23BP54727 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAD23BP54727 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.67■□□□□ 0.58
RAD23BP54727 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAD23BP54727 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAD23BP54727 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.66■□□□□ 0.58
RAD23BP54727 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAD23BP54727 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAD23BP54727 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
RAD23BP54727 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAD23BP54727 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAD23BP54727 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
RAD23BP54727 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAD23BP54727 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAD23BP54727 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.66■□□□□ 0.58
RAD23BP54727 AC106795.1-205ENST00000512851 1056 ntBASIC18.66■□□□□ 0.58
RAD23BP54727 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAD23BP54727 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAD23BP54727 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.66■□□□□ 0.58
RAD23BP54727 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAD23BP54727 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RAD23BP54727 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.66■□□□□ 0.58
RAD23BP54727 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAD23BP54727 REXO1L6P-202ENST00000619970 1078 ntBASIC18.66■□□□□ 0.58
RAD23BP54727 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAD23BP54727 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAD23BP54727 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAD23BP54727 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAD23BP54727 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.66■□□□□ 0.58
RAD23BP54727 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAD23BP54727 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAD23BP54727 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAD23BP54727 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.66■□□□□ 0.58
RAD23BP54727 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.66■□□□□ 0.58
RAD23BP54727 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RAD23BP54727 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.66■□□□□ 0.58
RAD23BP54727 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAD23BP54727 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAD23BP54727 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAD23BP54727 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAD23BP54727 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
RAD23BP54727 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAD23BP54727 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RAD23BP54727 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAD23BP54727 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAD23BP54727 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.65■□□□□ 0.58
RAD23BP54727 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.65■□□□□ 0.58
RAD23BP54727 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
RAD23BP54727 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAD23BP54727 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.65■□□□□ 0.58
RAD23BP54727 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.65■□□□□ 0.58
RAD23BP54727 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.65■□□□□ 0.58
RAD23BP54727 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.65■□□□□ 0.58
RAD23BP54727 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.65■□□□□ 0.58
RAD23BP54727 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.65■□□□□ 0.58
RAD23BP54727 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.65■□□□□ 0.58
RAD23BP54727 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RAD23BP54727 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.65■□□□□ 0.58
RAD23BP54727 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAD23BP54727 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAD23BP54727 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAD23BP54727 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.65■□□□□ 0.58
RAD23BP54727 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAD23BP54727 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAD23BP54727 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAD23BP54727 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAD23BP54727 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
RAD23BP54727 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.64■□□□□ 0.58
RAD23BP54727 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.64■□□□□ 0.58
RAD23BP54727 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RAD23BP54727 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RAD23BP54727 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms