Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.87■□□□□ 0.29
RAB28P51157 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB28P51157 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RAB28P51157 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.86■□□□□ 0.29
RAB28P51157 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
RAB28P51157 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RAB28P51157 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RAB28P51157 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.86■□□□□ 0.29
RAB28P51157 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB28P51157 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB28P51157 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB28P51157 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB28P51157 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB28P51157 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB28P51157 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB28P51157 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB28P51157 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.86■□□□□ 0.29
RAB28P51157 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.86■□□□□ 0.29
RAB28P51157 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.86■□□□□ 0.29
RAB28P51157 AC025062.2-201ENST00000605477 670 ntBASIC16.86■□□□□ 0.29
RAB28P51157 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.86■□□□□ 0.29
RAB28P51157 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB28P51157 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB28P51157 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RAB28P51157 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
RAB28P51157 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB28P51157 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.86■□□□□ 0.29
RAB28P51157 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB28P51157 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB28P51157 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB28P51157 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RAB28P51157 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB28P51157 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
RAB28P51157 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAB28P51157 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB28P51157 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB28P51157 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RAB28P51157 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB28P51157 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAB28P51157 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB28P51157 AC018712.1-201ENST00000455767 687 ntBASIC16.85■□□□□ 0.29
RAB28P51157 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RAB28P51157 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.85■□□□□ 0.29
RAB28P51157 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB28P51157 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB28P51157 AL662844.1-201ENST00000546340 181 ntBASIC16.85■□□□□ 0.29
RAB28P51157 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB28P51157 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB28P51157 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RAB28P51157 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB28P51157 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.85■□□□□ 0.29
RAB28P51157 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB28P51157 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB28P51157 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB28P51157 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.85■□□□□ 0.29
RAB28P51157 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB28P51157 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RAB28P51157 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.85■□□□□ 0.29
RAB28P51157 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.85■□□□□ 0.29
RAB28P51157 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB28P51157 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB28P51157 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RAB28P51157 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB28P51157 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB28P51157 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB28P51157 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB28P51157 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.85■□□□□ 0.29
RAB28P51157 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB28P51157 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB28P51157 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB28P51157 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAB28P51157 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB28P51157 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RAB28P51157 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB28P51157 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAB28P51157 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RAB28P51157 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB28P51157 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB28P51157 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB28P51157 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB28P51157 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB28P51157 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB28P51157 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB28P51157 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB28P51157 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.84■□□□□ 0.29
RAB28P51157 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB28P51157 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB28P51157 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.84■□□□□ 0.29
RAB28P51157 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.84■□□□□ 0.29
RAB28P51157 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB28P51157 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB28P51157 AL773604.1-201ENST00000617417 272 ntBASIC16.84■□□□□ 0.29
RAB28P51157 AL589182.2-201ENST00000619332 1049 ntBASIC16.84■□□□□ 0.29
RAB28P51157 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RAB28P51157 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
RAB28P51157 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.84■□□□□ 0.29
RAB28P51157 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB28P51157 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB28P51157 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB28P51157 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms