Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TUBP50607 RPS2P28-201ENST00000314255 741 ntBASIC18.42■□□□□ 0.54
TUBP50607 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TUBP50607 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.42■□□□□ 0.54
TUBP50607 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TUBP50607 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TUBP50607 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.42■□□□□ 0.54
TUBP50607 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TUBP50607 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TUBP50607 AC021087.4-201ENST00000563761 564 ntBASIC18.42■□□□□ 0.54
TUBP50607 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TUBP50607 BX640515.1-201ENST00000617215 977 ntBASIC18.42■□□□□ 0.54
TUBP50607 AC148477.8-201ENST00000624298 468 ntBASIC18.42■□□□□ 0.54
TUBP50607 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.42■□□□□ 0.54
TUBP50607 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TUBP50607 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
TUBP50607 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TUBP50607 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TUBP50607 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TUBP50607 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TUBP50607 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TUBP50607 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TUBP50607 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TUBP50607 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TUBP50607 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.41■□□□□ 0.54
TUBP50607 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TUBP50607 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TUBP50607 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
TUBP50607 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TUBP50607 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TUBP50607 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TUBP50607 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.41■□□□□ 0.54
TUBP50607 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TUBP50607 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TUBP50607 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TUBP50607 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TUBP50607 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TUBP50607 AC093909.1-201ENST00000504731 1122 ntBASIC18.41■□□□□ 0.54
TUBP50607 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.41■□□□□ 0.54
TUBP50607 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.41■□□□□ 0.54
TUBP50607 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
TUBP50607 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TUBP50607 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TUBP50607 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TUBP50607 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TUBP50607 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.41■□□□□ 0.54
TUBP50607 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TUBP50607 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TUBP50607 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TUBP50607 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.4■□□□□ 0.54
TUBP50607 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
TUBP50607 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TUBP50607 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TUBP50607 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TUBP50607 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.4■□□□□ 0.54
TUBP50607 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TUBP50607 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TUBP50607 AL049757.1-201ENST00000616842 1596 ntBASIC18.4■□□□□ 0.54
TUBP50607 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TUBP50607 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TUBP50607 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.4■□□□□ 0.54
TUBP50607 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.4■□□□□ 0.54
TUBP50607 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.4■□□□□ 0.54
TUBP50607 FAM215A-202ENST00000632077 792 ntBASIC18.4■□□□□ 0.54
TUBP50607 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TUBP50607 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TUBP50607 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TUBP50607 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TUBP50607 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TUBP50607 AC009949.1-201ENST00000623048 1830 ntBASIC18.39■□□□□ 0.54
TUBP50607 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.39■□□□□ 0.54
TUBP50607 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
TUBP50607 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TUBP50607 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.39■□□□□ 0.53
TUBP50607 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TUBP50607 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.39■□□□□ 0.53
TUBP50607 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TUBP50607 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.39■□□□□ 0.53
TUBP50607 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TUBP50607 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TUBP50607 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
TUBP50607 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
TUBP50607 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TUBP50607 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.39■□□□□ 0.53
TUBP50607 SPDYE21P-201ENST00000413323 827 ntBASIC18.39■□□□□ 0.53
TUBP50607 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TUBP50607 SLC25A6P5-201ENST00000435663 894 ntBASIC18.39■□□□□ 0.53
TUBP50607 HNRNPDP1-201ENST00000439535 754 ntBASIC18.39■□□□□ 0.53
TUBP50607 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.39■□□□□ 0.53
TUBP50607 AC079776.4-201ENST00000511039 504 ntBASIC18.39■□□□□ 0.53
TUBP50607 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.39■□□□□ 0.53
TUBP50607 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TUBP50607 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.39■□□□□ 0.53
TUBP50607 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.39■□□□□ 0.53
TUBP50607 NKAPP1-205ENST00000585790 367 ntBASIC18.39■□□□□ 0.53
TUBP50607 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.39■□□□□ 0.53
TUBP50607 AC025062.2-201ENST00000605477 670 ntBASIC18.39■□□□□ 0.53
TUBP50607 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TUBP50607 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TUBP50607 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms