Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SRP9P49458 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
SRP9P49458 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRP9P49458 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SRP9P49458 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.55■□□□□ 0.08
SRP9P49458 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRP9P49458 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.55■□□□□ 0.08
SRP9P49458 LINC01311-201ENST00000565162 1445 ntBASIC15.55■□□□□ 0.08
SRP9P49458 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRP9P49458 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.55■□□□□ 0.08
SRP9P49458 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRP9P49458 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.55■□□□□ 0.08
SRP9P49458 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.55■□□□□ 0.08
SRP9P49458 KRT18P38-201ENST00000449496 1282 ntBASIC15.55■□□□□ 0.08
SRP9P49458 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.55■□□□□ 0.08
SRP9P49458 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.55■□□□□ 0.08
SRP9P49458 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.55■□□□□ 0.08
SRP9P49458 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.55■□□□□ 0.08
SRP9P49458 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
SRP9P49458 NTF6B-201ENST00000591913 560 ntBASIC15.55■□□□□ 0.08
SRP9P49458 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.55■□□□□ 0.08
SRP9P49458 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.55■□□□□ 0.08
SRP9P49458 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.55■□□□□ 0.08
SRP9P49458 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRP9P49458 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRP9P49458 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
SRP9P49458 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.55■□□□□ 0.08
SRP9P49458 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRP9P49458 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRP9P49458 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRP9P49458 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SRP9P49458 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRP9P49458 AL391807.1-203ENST00000604392 2365 ntBASIC15.55■□□□□ 0.08
SRP9P49458 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRP9P49458 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRP9P49458 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRP9P49458 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRP9P49458 SDHAP2-201ENST00000455183 2001 ntBASIC15.55■□□□□ 0.08
SRP9P49458 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SRP9P49458 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.54■□□□□ 0.08
SRP9P49458 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SRP9P49458 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SRP9P49458 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRP9P49458 AL596257.1-201ENST00000641463 2694 ntBASIC15.54■□□□□ 0.08
SRP9P49458 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SRP9P49458 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRP9P49458 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SRP9P49458 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.54■□□□□ 0.08
SRP9P49458 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SRP9P49458 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SRP9P49458 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.54■□□□□ 0.08
SRP9P49458 AC087388.1-201ENST00000571370 1112 ntBASIC15.54■□□□□ 0.08
SRP9P49458 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.54■□□□□ 0.08
SRP9P49458 AC010331.1-201ENST00000611423 582 ntBASIC15.54■□□□□ 0.08
SRP9P49458 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.54■□□□□ 0.08
SRP9P49458 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRP9P49458 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRP9P49458 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
SRP9P49458 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SRP9P49458 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SRP9P49458 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRP9P49458 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.54■□□□□ 0.08
SRP9P49458 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRP9P49458 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRP9P49458 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRP9P49458 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SRP9P49458 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.54■□□□□ 0.08
SRP9P49458 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.54■□□□□ 0.08
SRP9P49458 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
SRP9P49458 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
SRP9P49458 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRP9P49458 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
SRP9P49458 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRP9P49458 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SRP9P49458 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRP9P49458 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRP9P49458 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SRP9P49458 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRP9P49458 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.53■□□□□ 0.08
SRP9P49458 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.53■□□□□ 0.08
SRP9P49458 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRP9P49458 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRP9P49458 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.53■□□□□ 0.08
SRP9P49458 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.53■□□□□ 0.08
SRP9P49458 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.53■□□□□ 0.08
SRP9P49458 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.53■□□□□ 0.08
SRP9P49458 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.53■□□□□ 0.08
SRP9P49458 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SRP9P49458 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SRP9P49458 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRP9P49458 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
SRP9P49458 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRP9P49458 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
SRP9P49458 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.53■□□□□ 0.08
SRP9P49458 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
SRP9P49458 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SRP9P49458 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SRP9P49458 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SRP9P49458 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.53■□□□□ 0.08
SRP9P49458 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms