Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.82■□□□□ 0.12
ATRXP46100 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.82■□□□□ 0.12
ATRXP46100 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.82■□□□□ 0.12
ATRXP46100 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATRXP46100 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATRXP46100 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATRXP46100 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATRXP46100 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATRXP46100 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
ATRXP46100 AC002056.1-201ENST00000395613 760 ntBASIC15.82■□□□□ 0.12
ATRXP46100 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.82■□□□□ 0.12
ATRXP46100 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.82■□□□□ 0.12
ATRXP46100 CXCL1P1-201ENST00000502804 216 ntBASIC15.82■□□□□ 0.12
ATRXP46100 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.82■□□□□ 0.12
ATRXP46100 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.82■□□□□ 0.12
ATRXP46100 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.82■□□□□ 0.12
ATRXP46100 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATRXP46100 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATRXP46100 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
ATRXP46100 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC15.82■□□□□ 0.12
ATRXP46100 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATRXP46100 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
ATRXP46100 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATRXP46100 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATRXP46100 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.82■□□□□ 0.12
ATRXP46100 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATRXP46100 PTCHD3P3-201ENST00000403073 906 ntBASIC15.82■□□□□ 0.12
ATRXP46100 TSSK5P-201ENST00000423978 907 ntBASIC15.82■□□□□ 0.12
ATRXP46100 GOLGA2P4-201ENST00000441462 777 ntBASIC15.82■□□□□ 0.12
ATRXP46100 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATRXP46100 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATRXP46100 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
ATRXP46100 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC15.81■□□□□ 0.12
ATRXP46100 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATRXP46100 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.81■□□□□ 0.12
ATRXP46100 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
ATRXP46100 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATRXP46100 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATRXP46100 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATRXP46100 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
ATRXP46100 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC15.81■□□□□ 0.12
ATRXP46100 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.81■□□□□ 0.12
ATRXP46100 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.81■□□□□ 0.12
ATRXP46100 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATRXP46100 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATRXP46100 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC15.81■□□□□ 0.12
ATRXP46100 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.81■□□□□ 0.12
ATRXP46100 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.81■□□□□ 0.12
ATRXP46100 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATRXP46100 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.81■□□□□ 0.12
ATRXP46100 AC133552.6-201ENST00000613406 534 ntBASIC15.81■□□□□ 0.12
ATRXP46100 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATRXP46100 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATRXP46100 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATRXP46100 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATRXP46100 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.81■□□□□ 0.12
ATRXP46100 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATRXP46100 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATRXP46100 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATRXP46100 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATRXP46100 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATRXP46100 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.8■□□□□ 0.12
ATRXP46100 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.8■□□□□ 0.12
ATRXP46100 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATRXP46100 RN7SL752P-201ENST00000463779 287 ntBASIC15.8■□□□□ 0.12
ATRXP46100 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATRXP46100 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.8■□□□□ 0.12
ATRXP46100 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ATRXP46100 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATRXP46100 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.8■□□□□ 0.12
ATRXP46100 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.8■□□□□ 0.12
ATRXP46100 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATRXP46100 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC15.8■□□□□ 0.12
ATRXP46100 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATRXP46100 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATRXP46100 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATRXP46100 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATRXP46100 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC15.8■□□□□ 0.12
ATRXP46100 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
ATRXP46100 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATRXP46100 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
ATRXP46100 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATRXP46100 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATRXP46100 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ATRXP46100 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATRXP46100 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATRXP46100 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.8■□□□□ 0.12
ATRXP46100 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
ATRXP46100 SNX29P1-201ENST00000548357 1007 ntBASIC15.8■□□□□ 0.12
ATRXP46100 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.8■□□□□ 0.12
ATRXP46100 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATRXP46100 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.8■□□□□ 0.12
ATRXP46100 AL512343.1-201ENST00000605837 169 ntBASIC15.8■□□□□ 0.12
ATRXP46100 AL158211.3-201ENST00000607385 239 ntBASIC15.8■□□□□ 0.12
ATRXP46100 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.8■□□□□ 0.12
ATRXP46100 ADM-207ENST00000530439 1839 ntTSL 2 BASIC15.8■□□□□ 0.12
ATRXP46100 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.8■□□□□ 0.12
ATRXP46100 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.8■□□□□ 0.12
ATRXP46100 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
ATRXP46100 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms