Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP8P40818 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP8P40818 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
USP8P40818 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
USP8P40818 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP8P40818 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP8P40818 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
USP8P40818 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.07■□□□□ 0.64
USP8P40818 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.07■□□□□ 0.64
USP8P40818 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.07■□□□□ 0.64
USP8P40818 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
USP8P40818 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
USP8P40818 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.07■□□□□ 0.64
USP8P40818 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.07■□□□□ 0.64
USP8P40818 AL513477.1-201ENST00000602865 2407 ntBASIC19.07■□□□□ 0.64
USP8P40818 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.07■□□□□ 0.64
USP8P40818 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
USP8P40818 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP8P40818 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP8P40818 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.07■□□□□ 0.64
USP8P40818 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
USP8P40818 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP8P40818 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.07■□□□□ 0.64
USP8P40818 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP8P40818 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
USP8P40818 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP8P40818 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP8P40818 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
USP8P40818 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USP8P40818 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP8P40818 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USP8P40818 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USP8P40818 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
USP8P40818 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.06■□□□□ 0.64
USP8P40818 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
USP8P40818 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP8P40818 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP8P40818 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP8P40818 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP8P40818 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
USP8P40818 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP8P40818 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USP8P40818 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.06■□□□□ 0.64
USP8P40818 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.06■□□□□ 0.64
USP8P40818 DDX43P3-201ENST00000441064 443 ntBASIC19.06■□□□□ 0.64
USP8P40818 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.06■□□□□ 0.64
USP8P40818 IGHV3-41-201ENST00000613121 348 ntBASIC19.06■□□□□ 0.64
USP8P40818 AC124864.1-201ENST00000623408 392 ntBASIC19.06■□□□□ 0.64
USP8P40818 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP8P40818 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP8P40818 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP8P40818 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.06■□□□□ 0.64
USP8P40818 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USP8P40818 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP8P40818 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USP8P40818 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP8P40818 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USP8P40818 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
USP8P40818 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.06■□□□□ 0.64
USP8P40818 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP8P40818 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP8P40818 REXO1L11P-201ENST00000620964 1927 ntBASIC19.06■□□□□ 0.64
USP8P40818 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP8P40818 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
USP8P40818 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP8P40818 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP8P40818 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.05■□□□□ 0.64
USP8P40818 AC133963.1-201ENST00000504166 1679 ntBASIC19.05■□□□□ 0.64
USP8P40818 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP8P40818 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP8P40818 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP8P40818 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.05■□□□□ 0.64
USP8P40818 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.05■□□□□ 0.64
USP8P40818 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP8P40818 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.05■□□□□ 0.64
USP8P40818 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP8P40818 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.05■□□□□ 0.64
USP8P40818 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.05■□□□□ 0.64
USP8P40818 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.05■□□□□ 0.64
USP8P40818 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP8P40818 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
USP8P40818 AL590326.2-201ENST00000625139 305 ntBASIC19.05■□□□□ 0.64
USP8P40818 AL121956.5-201ENST00000625261 221 ntBASIC19.05■□□□□ 0.64
USP8P40818 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.05■□□□□ 0.64
USP8P40818 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP8P40818 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP8P40818 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP8P40818 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP8P40818 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP8P40818 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP8P40818 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP8P40818 LINC00304-203ENST00000565008 1864 ntBASIC19.05■□□□□ 0.64
USP8P40818 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP8P40818 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
USP8P40818 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP8P40818 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.04■□□□□ 0.64
USP8P40818 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
USP8P40818 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP8P40818 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP8P40818 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms