Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCLP35914 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
HMGCLP35914 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCLP35914 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGCLP35914 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.37■□□□□ 0.37
HMGCLP35914 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGCLP35914 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGCLP35914 AL645608.8-201ENST00000606034 2086 ntBASIC17.37■□□□□ 0.37
HMGCLP35914 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.37■□□□□ 0.37
HMGCLP35914 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGCLP35914 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HMGCLP35914 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.37■□□□□ 0.37
HMGCLP35914 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.37■□□□□ 0.37
HMGCLP35914 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HMGCLP35914 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGCLP35914 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HMGCLP35914 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.37■□□□□ 0.37
HMGCLP35914 FAAHP1-202ENST00000446499 1238 ntBASIC17.37■□□□□ 0.37
HMGCLP35914 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.37■□□□□ 0.37
HMGCLP35914 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.37■□□□□ 0.37
HMGCLP35914 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HMGCLP35914 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.37■□□□□ 0.37
HMGCLP35914 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HMGCLP35914 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.37■□□□□ 0.37
HMGCLP35914 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.37■□□□□ 0.37
HMGCLP35914 AL022326.1-202ENST00000641533 845 ntBASIC17.37■□□□□ 0.37
HMGCLP35914 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HMGCLP35914 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGCLP35914 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
HMGCLP35914 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.37■□□□□ 0.37
HMGCLP35914 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGCLP35914 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.37■□□□□ 0.37
HMGCLP35914 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HMGCLP35914 AC004817.3-201ENST00000602957 2129 ntBASIC17.36■□□□□ 0.37
HMGCLP35914 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCLP35914 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HMGCLP35914 AC116353.5-201ENST00000638148 1699 ntBASIC17.36■□□□□ 0.37
HMGCLP35914 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.36■□□□□ 0.37
HMGCLP35914 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.36■□□□□ 0.37
HMGCLP35914 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCLP35914 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.36■□□□□ 0.37
HMGCLP35914 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCLP35914 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCLP35914 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCLP35914 AC004870.1-201ENST00000315132 882 ntBASIC17.36■□□□□ 0.37
HMGCLP35914 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCLP35914 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCLP35914 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HMGCLP35914 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.36■□□□□ 0.37
HMGCLP35914 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
HMGCLP35914 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCLP35914 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.36■□□□□ 0.37
HMGCLP35914 SART3-203ENST00000546611 1184 ntBASIC17.36■□□□□ 0.37
HMGCLP35914 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.36■□□□□ 0.37
HMGCLP35914 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.36■□□□□ 0.37
HMGCLP35914 AL121912.1-201ENST00000603683 238 ntBASIC17.36■□□□□ 0.37
HMGCLP35914 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HMGCLP35914 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.36■□□□□ 0.37
HMGCLP35914 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCLP35914 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.36■□□□□ 0.37
HMGCLP35914 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCLP35914 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCLP35914 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.36■□□□□ 0.37
HMGCLP35914 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCLP35914 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCLP35914 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.35■□□□□ 0.37
HMGCLP35914 AC020916.1-201ENST00000587762 1774 ntBASIC17.35■□□□□ 0.37
HMGCLP35914 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HMGCLP35914 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLP35914 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLP35914 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLP35914 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLP35914 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HMGCLP35914 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLP35914 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLP35914 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.35■□□□□ 0.37
HMGCLP35914 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLP35914 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLP35914 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLP35914 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLP35914 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLP35914 ACTG1P4-201ENST00000425123 1122 ntBASIC17.35■□□□□ 0.37
HMGCLP35914 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.35■□□□□ 0.37
HMGCLP35914 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HMGCLP35914 BX005266.1-201ENST00000473402 457 ntBASIC17.35■□□□□ 0.37
HMGCLP35914 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HMGCLP35914 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.35■□□□□ 0.37
HMGCLP35914 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLP35914 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.35■□□□□ 0.37
HMGCLP35914 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLP35914 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.35■□□□□ 0.37
HMGCLP35914 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.35■□□□□ 0.37
HMGCLP35914 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLP35914 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLP35914 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLP35914 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLP35914 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.35■□□□□ 0.37
HMGCLP35914 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLP35914 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLP35914 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms