Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
CTNNA1P35221 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTNNA1P35221 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.47■□□□□ 0.55
CTNNA1P35221 AC096633.1-201ENST00000422446 749 ntBASIC18.47■□□□□ 0.55
CTNNA1P35221 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTNNA1P35221 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.47■□□□□ 0.55
CTNNA1P35221 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
CTNNA1P35221 AC005363.2-201ENST00000618631 242 ntBASIC18.47■□□□□ 0.55
CTNNA1P35221 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.47■□□□□ 0.55
CTNNA1P35221 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CTNNA1P35221 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTNNA1P35221 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTNNA1P35221 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CTNNA1P35221 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTNNA1P35221 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTNNA1P35221 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTNNA1P35221 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTNNA1P35221 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTNNA1P35221 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTNNA1P35221 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTNNA1P35221 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTNNA1P35221 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTNNA1P35221 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.47■□□□□ 0.55
CTNNA1P35221 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.47■□□□□ 0.55
CTNNA1P35221 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.47■□□□□ 0.55
CTNNA1P35221 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CTNNA1P35221 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTNNA1P35221 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTNNA1P35221 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTNNA1P35221 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTNNA1P35221 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.46■□□□□ 0.55
CTNNA1P35221 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.46■□□□□ 0.55
CTNNA1P35221 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTNNA1P35221 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CTNNA1P35221 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTNNA1P35221 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTNNA1P35221 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTNNA1P35221 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTNNA1P35221 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.46■□□□□ 0.55
CTNNA1P35221 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.46■□□□□ 0.55
CTNNA1P35221 HBZP1-201ENST00000354915 429 ntBASIC18.46■□□□□ 0.55
CTNNA1P35221 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CTNNA1P35221 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTNNA1P35221 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.46■□□□□ 0.55
CTNNA1P35221 AL137013.1-201ENST00000432946 1228 ntBASIC18.46■□□□□ 0.55
CTNNA1P35221 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.46■□□□□ 0.55
CTNNA1P35221 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTNNA1P35221 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
CTNNA1P35221 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.46■□□□□ 0.55
CTNNA1P35221 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CTNNA1P35221 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTNNA1P35221 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTNNA1P35221 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.46■□□□□ 0.55
CTNNA1P35221 AC116353.5-201ENST00000638148 1699 ntBASIC18.46■□□□□ 0.55
CTNNA1P35221 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTNNA1P35221 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTNNA1P35221 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.46■□□□□ 0.55
CTNNA1P35221 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.46■□□□□ 0.55
CTNNA1P35221 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CTNNA1P35221 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTNNA1P35221 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.46■□□□□ 0.55
CTNNA1P35221 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
CTNNA1P35221 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.54
CTNNA1P35221 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.46■□□□□ 0.54
CTNNA1P35221 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTNNA1P35221 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
CTNNA1P35221 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTNNA1P35221 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTNNA1P35221 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTNNA1P35221 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.45■□□□□ 0.54
CTNNA1P35221 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.45■□□□□ 0.54
CTNNA1P35221 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTNNA1P35221 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTNNA1P35221 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.45■□□□□ 0.54
CTNNA1P35221 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTNNA1P35221 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTNNA1P35221 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CTNNA1P35221 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTNNA1P35221 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTNNA1P35221 KRT18P38-201ENST00000449496 1282 ntBASIC18.45■□□□□ 0.54
CTNNA1P35221 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
CTNNA1P35221 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.45■□□□□ 0.54
CTNNA1P35221 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTNNA1P35221 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.45■□□□□ 0.54
CTNNA1P35221 AC133561.5-201ENST00000635547 218 ntBASIC18.45■□□□□ 0.54
CTNNA1P35221 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CTNNA1P35221 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTNNA1P35221 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTNNA1P35221 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.45■□□□□ 0.54
CTNNA1P35221 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.45■□□□□ 0.54
CTNNA1P35221 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.45■□□□□ 0.54
CTNNA1P35221 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTNNA1P35221 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTNNA1P35221 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.45■□□□□ 0.54
CTNNA1P35221 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTNNA1P35221 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.45■□□□□ 0.54
CTNNA1P35221 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTNNA1P35221 PCDHB19P-201ENST00000570871 2371 ntBASIC18.45■□□□□ 0.54
CTNNA1P35221 AC106886.4-201ENST00000623557 2502 ntBASIC18.45■□□□□ 0.54
CTNNA1P35221 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms