Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXC8P31273 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXC8P31273 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.9■□□□□ 0.62
HOXC8P31273 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXC8P31273 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXC8P31273 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.89■□□□□ 0.62
HOXC8P31273 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HOXC8P31273 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.89■□□□□ 0.62
HOXC8P31273 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.89■□□□□ 0.61
HOXC8P31273 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC8P31273 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC8P31273 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
HOXC8P31273 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC8P31273 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.89■□□□□ 0.61
HOXC8P31273 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
HOXC8P31273 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.89■□□□□ 0.61
HOXC8P31273 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC8P31273 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.89■□□□□ 0.61
HOXC8P31273 AC023141.5-201ENST00000458585 616 ntBASIC18.89■□□□□ 0.61
HOXC8P31273 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.89■□□□□ 0.61
HOXC8P31273 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.89■□□□□ 0.61
HOXC8P31273 MIR3197-201ENST00000582241 73 ntBASIC18.89■□□□□ 0.61
HOXC8P31273 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC8P31273 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.89■□□□□ 0.61
HOXC8P31273 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
HOXC8P31273 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.89■□□□□ 0.61
HOXC8P31273 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC8P31273 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC8P31273 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.89■□□□□ 0.61
HOXC8P31273 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.89■□□□□ 0.61
HOXC8P31273 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC8P31273 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC8P31273 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
HOXC8P31273 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC8P31273 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.89■□□□□ 0.61
HOXC8P31273 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC8P31273 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
HOXC8P31273 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC8P31273 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC8P31273 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC8P31273 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.88■□□□□ 0.61
HOXC8P31273 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC8P31273 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
HOXC8P31273 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC8P31273 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC8P31273 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.88■□□□□ 0.61
HOXC8P31273 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HOXC8P31273 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.88■□□□□ 0.61
HOXC8P31273 AC109322.1-201ENST00000524499 1264 ntBASIC18.88■□□□□ 0.61
HOXC8P31273 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
HOXC8P31273 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
HOXC8P31273 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.88■□□□□ 0.61
HOXC8P31273 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.88■□□□□ 0.61
HOXC8P31273 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.88■□□□□ 0.61
HOXC8P31273 AC015911.4-201ENST00000588022 1070 ntBASIC18.88■□□□□ 0.61
HOXC8P31273 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.88■□□□□ 0.61
HOXC8P31273 AC106028.4-201ENST00000614509 607 ntBASIC18.88■□□□□ 0.61
HOXC8P31273 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HOXC8P31273 AC009093.7-201ENST00000623853 1223 ntBASIC18.88■□□□□ 0.61
HOXC8P31273 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.88■□□□□ 0.61
HOXC8P31273 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
HOXC8P31273 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC8P31273 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC8P31273 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.88■□□□□ 0.61
HOXC8P31273 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC8P31273 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC8P31273 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC8P31273 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC8P31273 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.88■□□□□ 0.61
HOXC8P31273 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXC8P31273 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
HOXC8P31273 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXC8P31273 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.87■□□□□ 0.61
HOXC8P31273 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
HOXC8P31273 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXC8P31273 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXC8P31273 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.87■□□□□ 0.61
HOXC8P31273 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HOXC8P31273 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXC8P31273 AL627223.1-201ENST00000416693 442 ntBASIC18.87■□□□□ 0.61
HOXC8P31273 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.87■□□□□ 0.61
HOXC8P31273 AC133963.1-201ENST00000504166 1679 ntBASIC18.87■□□□□ 0.61
HOXC8P31273 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
HOXC8P31273 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HOXC8P31273 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HOXC8P31273 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.87■□□□□ 0.61
HOXC8P31273 MIR4515-201ENST00000584082 81 ntBASIC18.87■□□□□ 0.61
HOXC8P31273 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.87■□□□□ 0.61
HOXC8P31273 AC026120.1-201ENST00000611536 926 ntBASIC18.87■□□□□ 0.61
HOXC8P31273 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXC8P31273 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HOXC8P31273 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXC8P31273 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
HOXC8P31273 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXC8P31273 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HOXC8P31273 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC8P31273 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXC8P31273 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
HOXC8P31273 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
HOXC8P31273 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms