Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.22■□□□□ 0.35
VARSP26640 AC092119.3-201ENST00000612618 583 ntBASIC17.22■□□□□ 0.35
VARSP26640 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.22■□□□□ 0.35
VARSP26640 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
VARSP26640 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
VARSP26640 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.22■□□□□ 0.35
VARSP26640 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VARSP26640 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.22■□□□□ 0.35
VARSP26640 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
VARSP26640 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VARSP26640 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
VARSP26640 AL023806.1-201ENST00000603994 1649 ntBASIC17.21■□□□□ 0.35
VARSP26640 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VARSP26640 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
VARSP26640 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
VARSP26640 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
VARSP26640 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
VARSP26640 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
VARSP26640 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
VARSP26640 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
VARSP26640 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VARSP26640 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VARSP26640 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VARSP26640 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VARSP26640 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
VARSP26640 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VARSP26640 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VARSP26640 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.21■□□□□ 0.35
VARSP26640 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VARSP26640 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.21■□□□□ 0.35
VARSP26640 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.21■□□□□ 0.35
VARSP26640 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.21■□□□□ 0.35
VARSP26640 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
VARSP26640 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.21■□□□□ 0.35
VARSP26640 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.21■□□□□ 0.35
VARSP26640 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VARSP26640 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VARSP26640 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VARSP26640 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
VARSP26640 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
VARSP26640 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
VARSP26640 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VARSP26640 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
VARSP26640 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
VARSP26640 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
VARSP26640 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.21■□□□□ 0.34
VARSP26640 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
VARSP26640 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
VARSP26640 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VARSP26640 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.2■□□□□ 0.34
VARSP26640 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VARSP26640 AC022211.2-201ENST00000585075 2527 ntBASIC17.2■□□□□ 0.34
VARSP26640 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VARSP26640 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
VARSP26640 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VARSP26640 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VARSP26640 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VARSP26640 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VARSP26640 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
VARSP26640 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
VARSP26640 AC012313.10-201ENST00000623509 926 ntBASIC17.2■□□□□ 0.34
VARSP26640 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VARSP26640 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VARSP26640 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.2■□□□□ 0.34
VARSP26640 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.2■□□□□ 0.34
VARSP26640 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
VARSP26640 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.2■□□□□ 0.34
VARSP26640 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VARSP26640 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
VARSP26640 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VARSP26640 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VARSP26640 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.2■□□□□ 0.34
VARSP26640 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VARSP26640 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
VARSP26640 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
VARSP26640 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VARSP26640 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VARSP26640 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
VARSP26640 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VARSP26640 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VARSP26640 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.19■□□□□ 0.34
VARSP26640 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
VARSP26640 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
VARSP26640 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
VARSP26640 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VARSP26640 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VARSP26640 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VARSP26640 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
VARSP26640 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VARSP26640 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
VARSP26640 FDX1P1-201ENST00000449115 551 ntBASIC17.19■□□□□ 0.34
VARSP26640 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.19■□□□□ 0.34
VARSP26640 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VARSP26640 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.19■□□□□ 0.34
VARSP26640 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VARSP26640 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VARSP26640 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.19■□□□□ 0.34
VARSP26640 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VARSP26640 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
VARSP26640 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms