Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.77■□□□□ 0.6
CD58P19256 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.77■□□□□ 0.59
CD58P19256 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CD58P19256 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.59
CD58P19256 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
CD58P19256 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CD58P19256 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.77■□□□□ 0.59
CD58P19256 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CD58P19256 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.77■□□□□ 0.59
CD58P19256 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD58P19256 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
CD58P19256 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.76■□□□□ 0.59
CD58P19256 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.76■□□□□ 0.59
CD58P19256 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.76■□□□□ 0.59
CD58P19256 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.76■□□□□ 0.59
CD58P19256 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CD58P19256 AC139713.2-201ENST00000641328 2723 ntBASIC18.76■□□□□ 0.59
CD58P19256 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.76■□□□□ 0.59
CD58P19256 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CD58P19256 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD58P19256 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CD58P19256 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD58P19256 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD58P19256 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD58P19256 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD58P19256 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD58P19256 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD58P19256 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.76■□□□□ 0.59
CD58P19256 AD001527.2-201ENST00000622994 785 ntBASIC18.76■□□□□ 0.59
CD58P19256 AC073592.5-201ENST00000624854 528 ntBASIC18.76■□□□□ 0.59
CD58P19256 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CD58P19256 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD58P19256 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.76■□□□□ 0.59
CD58P19256 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.76■□□□□ 0.59
CD58P19256 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CD58P19256 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD58P19256 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CD58P19256 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.75■□□□□ 0.59
CD58P19256 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.75■□□□□ 0.59
CD58P19256 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD58P19256 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CD58P19256 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.75■□□□□ 0.59
CD58P19256 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.75■□□□□ 0.59
CD58P19256 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CD58P19256 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD58P19256 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD58P19256 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CD58P19256 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD58P19256 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD58P19256 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.75■□□□□ 0.59
CD58P19256 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD58P19256 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.75■□□□□ 0.59
CD58P19256 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD58P19256 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD58P19256 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.75■□□□□ 0.59
CD58P19256 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CD58P19256 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.75■□□□□ 0.59
CD58P19256 ABCD1P5-201ENST00000445663 754 ntBASIC18.75■□□□□ 0.59
CD58P19256 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.75■□□□□ 0.59
CD58P19256 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.75■□□□□ 0.59
CD58P19256 LINC01711-201ENST00000598340 967 ntBASIC18.75■□□□□ 0.59
CD58P19256 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.75■□□□□ 0.59
CD58P19256 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CD58P19256 AL353593.2-201ENST00000602529 1483 ntBASIC18.75■□□□□ 0.59
CD58P19256 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD58P19256 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CD58P19256 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.75■□□□□ 0.59
CD58P19256 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD58P19256 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD58P19256 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CD58P19256 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.75■□□□□ 0.59
CD58P19256 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD58P19256 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CD58P19256 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CD58P19256 AC132938.5-201ENST00000624980 1813 ntBASIC18.74■□□□□ 0.59
CD58P19256 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CD58P19256 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CD58P19256 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CD58P19256 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CD58P19256 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CD58P19256 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CD58P19256 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CD58P19256 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CD58P19256 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
CD58P19256 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CD58P19256 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CD58P19256 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.74■□□□□ 0.59
CD58P19256 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
CD58P19256 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CD58P19256 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.74■□□□□ 0.59
CD58P19256 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CD58P19256 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CD58P19256 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CD58P19256 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.74■□□□□ 0.59
CD58P19256 AL139327.4-201ENST00000612362 153 ntBASIC18.74■□□□□ 0.59
CD58P19256 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.74■□□□□ 0.59
CD58P19256 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CD58P19256 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CD58P19256 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CD58P19256 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms