Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NELFEP18615 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NELFEP18615 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NELFEP18615 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.31■□□□□ 0.36
NELFEP18615 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.31■□□□□ 0.36
NELFEP18615 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NELFEP18615 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.31■□□□□ 0.36
NELFEP18615 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NELFEP18615 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NELFEP18615 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.3■□□□□ 0.36
NELFEP18615 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NELFEP18615 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NELFEP18615 CICP6-201ENST00000457191 2729 ntBASIC17.3■□□□□ 0.36
NELFEP18615 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
NELFEP18615 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
NELFEP18615 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NELFEP18615 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NELFEP18615 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NELFEP18615 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NELFEP18615 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NELFEP18615 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NELFEP18615 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NELFEP18615 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NELFEP18615 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NELFEP18615 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NELFEP18615 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.3■□□□□ 0.36
NELFEP18615 FDX1P1-201ENST00000449115 551 ntBASIC17.3■□□□□ 0.36
NELFEP18615 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NELFEP18615 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NELFEP18615 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.3■□□□□ 0.36
NELFEP18615 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NELFEP18615 BNIP3P18-201ENST00000593976 575 ntBASIC17.3■□□□□ 0.36
NELFEP18615 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.3■□□□□ 0.36
NELFEP18615 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.3■□□□□ 0.36
NELFEP18615 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NELFEP18615 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NELFEP18615 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NELFEP18615 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.3■□□□□ 0.36
NELFEP18615 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NELFEP18615 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NELFEP18615 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NELFEP18615 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.3■□□□□ 0.36
NELFEP18615 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NELFEP18615 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NELFEP18615 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
NELFEP18615 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NELFEP18615 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.3■□□□□ 0.36
NELFEP18615 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
NELFEP18615 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NELFEP18615 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NELFEP18615 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NELFEP18615 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NELFEP18615 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.29■□□□□ 0.36
NELFEP18615 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NELFEP18615 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NELFEP18615 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
NELFEP18615 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NELFEP18615 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.29■□□□□ 0.36
NELFEP18615 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
NELFEP18615 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.29■□□□□ 0.36
NELFEP18615 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.29■□□□□ 0.36
NELFEP18615 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.29■□□□□ 0.36
NELFEP18615 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NELFEP18615 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.29■□□□□ 0.36
NELFEP18615 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NELFEP18615 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NELFEP18615 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NELFEP18615 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.29■□□□□ 0.36
NELFEP18615 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.29■□□□□ 0.36
NELFEP18615 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.29■□□□□ 0.36
NELFEP18615 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.29■□□□□ 0.36
NELFEP18615 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NELFEP18615 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.29■□□□□ 0.36
NELFEP18615 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.29■□□□□ 0.36
NELFEP18615 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NELFEP18615 AL031008.1-201ENST00000619963 541 ntBASIC17.29■□□□□ 0.36
NELFEP18615 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NELFEP18615 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.29■□□□□ 0.36
NELFEP18615 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
NELFEP18615 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
NELFEP18615 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NELFEP18615 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.29■□□□□ 0.36
NELFEP18615 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NELFEP18615 KRT8P10-201ENST00000450021 1447 ntBASIC17.29■□□□□ 0.36
NELFEP18615 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.29■□□□□ 0.36
NELFEP18615 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.29■□□□□ 0.36
NELFEP18615 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.29■□□□□ 0.36
NELFEP18615 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
NELFEP18615 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NELFEP18615 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NELFEP18615 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NELFEP18615 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NELFEP18615 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NELFEP18615 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NELFEP18615 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NELFEP18615 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NELFEP18615 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NELFEP18615 GMCL1P1-201ENST00000463439 1581 ntBASIC17.28■□□□□ 0.36
NELFEP18615 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.28■□□□□ 0.36
NELFEP18615 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms