Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CTPS1P17812 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTPS1P17812 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTPS1P17812 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.58■□□□□ 0.4
CTPS1P17812 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.58■□□□□ 0.4
CTPS1P17812 AC148477.5-201ENST00000625164 1645 ntBASIC17.58■□□□□ 0.4
CTPS1P17812 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTPS1P17812 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.57■□□□□ 0.4
CTPS1P17812 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CTPS1P17812 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTPS1P17812 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.57■□□□□ 0.4
CTPS1P17812 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.57■□□□□ 0.4
CTPS1P17812 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTPS1P17812 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.57■□□□□ 0.4
CTPS1P17812 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTPS1P17812 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTPS1P17812 SART3-203ENST00000546611 1184 ntBASIC17.57■□□□□ 0.4
CTPS1P17812 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.57■□□□□ 0.4
CTPS1P17812 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.57■□□□□ 0.4
CTPS1P17812 NKAPP1-205ENST00000585790 367 ntBASIC17.57■□□□□ 0.4
CTPS1P17812 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.57■□□□□ 0.4
CTPS1P17812 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.57■□□□□ 0.4
CTPS1P17812 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTPS1P17812 AL139327.4-201ENST00000612362 153 ntBASIC17.57■□□□□ 0.4
CTPS1P17812 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CTPS1P17812 TP73-AS1-207ENST00000624167 988 ntBASIC17.57■□□□□ 0.4
CTPS1P17812 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTPS1P17812 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTPS1P17812 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTPS1P17812 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
CTPS1P17812 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTPS1P17812 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.57■□□□□ 0.4
CTPS1P17812 AL356309.3-201ENST00000624132 1934 ntBASIC17.57■□□□□ 0.4
CTPS1P17812 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CTPS1P17812 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTPS1P17812 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTPS1P17812 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTPS1P17812 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTPS1P17812 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTPS1P17812 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
CTPS1P17812 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTPS1P17812 AC003669.1-201ENST00000334569 611 ntBASIC17.56■□□□□ 0.4
CTPS1P17812 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTPS1P17812 MYCLP1-201ENST00000372451 1075 ntBASIC17.56■□□□□ 0.4
CTPS1P17812 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTPS1P17812 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.56■□□□□ 0.4
CTPS1P17812 SPDYE21P-201ENST00000413323 827 ntBASIC17.56■□□□□ 0.4
CTPS1P17812 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CTPS1P17812 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTPS1P17812 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CTPS1P17812 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.56■□□□□ 0.4
CTPS1P17812 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.56■□□□□ 0.4
CTPS1P17812 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CTPS1P17812 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTPS1P17812 AC079776.2-201ENST00000641154 1609 ntBASIC17.56■□□□□ 0.4
CTPS1P17812 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTPS1P17812 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTPS1P17812 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
CTPS1P17812 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTPS1P17812 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTPS1P17812 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTPS1P17812 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.56■□□□□ 0.4
CTPS1P17812 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTPS1P17812 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTPS1P17812 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTPS1P17812 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTPS1P17812 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.55■□□□□ 0.4
CTPS1P17812 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.55■□□□□ 0.4
CTPS1P17812 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CTPS1P17812 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTPS1P17812 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTPS1P17812 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.55■□□□□ 0.4
CTPS1P17812 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTPS1P17812 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.55■□□□□ 0.4
CTPS1P17812 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTPS1P17812 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.55■□□□□ 0.4
CTPS1P17812 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CTPS1P17812 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTPS1P17812 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CTPS1P17812 FAAHP1-202ENST00000446499 1238 ntBASIC17.55■□□□□ 0.4
CTPS1P17812 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.55■□□□□ 0.4
CTPS1P17812 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.55■□□□□ 0.4
CTPS1P17812 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
CTPS1P17812 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.55■□□□□ 0.4
CTPS1P17812 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.55■□□□□ 0.4
CTPS1P17812 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.55■□□□□ 0.4
CTPS1P17812 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTPS1P17812 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTPS1P17812 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CTPS1P17812 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.55■□□□□ 0.4
CTPS1P17812 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTPS1P17812 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.55■□□□□ 0.4
CTPS1P17812 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTPS1P17812 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS1P17812 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS1P17812 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS1P17812 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.54■□□□□ 0.4
CTPS1P17812 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTPS1P17812 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.54■□□□□ 0.4
CTPS1P17812 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms