Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMPD1P17405 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMPD1P17405 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMPD1P17405 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
SMPD1P17405 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMPD1P17405 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMPD1P17405 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMPD1P17405 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMPD1P17405 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
SMPD1P17405 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMPD1P17405 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMPD1P17405 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.3■□□□□ 0.68
SMPD1P17405 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMPD1P17405 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMPD1P17405 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.3■□□□□ 0.68
SMPD1P17405 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.3■□□□□ 0.68
SMPD1P17405 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMPD1P17405 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMPD1P17405 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMPD1P17405 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SMPD1P17405 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMPD1P17405 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.3■□□□□ 0.68
SMPD1P17405 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.3■□□□□ 0.68
SMPD1P17405 ADH5P3-201ENST00000433842 1137 ntBASIC19.3■□□□□ 0.68
SMPD1P17405 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SMPD1P17405 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.3■□□□□ 0.68
SMPD1P17405 HLA-J-203ENST00000494367 1087 ntBASIC19.3■□□□□ 0.68
SMPD1P17405 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.3■□□□□ 0.68
SMPD1P17405 AC112191.1-201ENST00000523689 701 ntBASIC19.3■□□□□ 0.68
SMPD1P17405 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.3■□□□□ 0.68
SMPD1P17405 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.3■□□□□ 0.68
SMPD1P17405 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.3■□□□□ 0.68
SMPD1P17405 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
SMPD1P17405 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.3■□□□□ 0.68
SMPD1P17405 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.3■□□□□ 0.68
SMPD1P17405 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.3■□□□□ 0.68
SMPD1P17405 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.3■□□□□ 0.68
SMPD1P17405 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMPD1P17405 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMPD1P17405 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.3■□□□□ 0.68
SMPD1P17405 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMPD1P17405 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMPD1P17405 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMPD1P17405 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMPD1P17405 AC129492.6-201ENST00000611383 1305 ntBASIC19.29■□□□□ 0.68
SMPD1P17405 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMPD1P17405 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMPD1P17405 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMPD1P17405 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.29■□□□□ 0.68
SMPD1P17405 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.29■□□□□ 0.68
SMPD1P17405 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.29■□□□□ 0.68
SMPD1P17405 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SMPD1P17405 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.29■□□□□ 0.68
SMPD1P17405 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.29■□□□□ 0.68
SMPD1P17405 AC109322.1-201ENST00000524499 1264 ntBASIC19.29■□□□□ 0.68
SMPD1P17405 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.29■□□□□ 0.68
SMPD1P17405 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.29■□□□□ 0.68
SMPD1P17405 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMPD1P17405 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SMPD1P17405 LINC01451-201ENST00000623792 534 ntBASIC19.29■□□□□ 0.68
SMPD1P17405 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.29■□□□□ 0.68
SMPD1P17405 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.29■□□□□ 0.68
SMPD1P17405 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
SMPD1P17405 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SMPD1P17405 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMPD1P17405 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SMPD1P17405 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMPD1P17405 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMPD1P17405 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
SMPD1P17405 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMPD1P17405 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMPD1P17405 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMPD1P17405 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMPD1P17405 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
SMPD1P17405 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SMPD1P17405 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMPD1P17405 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMPD1P17405 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.28■□□□□ 0.68
SMPD1P17405 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMPD1P17405 FAM8A3P-201ENST00000427218 844 ntBASIC19.28■□□□□ 0.68
SMPD1P17405 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMPD1P17405 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.28■□□□□ 0.68
SMPD1P17405 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMPD1P17405 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.28■□□□□ 0.68
SMPD1P17405 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.28■□□□□ 0.68
SMPD1P17405 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.28■□□□□ 0.68
SMPD1P17405 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.28■□□□□ 0.68
SMPD1P17405 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMPD1P17405 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMPD1P17405 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMPD1P17405 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMPD1P17405 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMPD1P17405 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMPD1P17405 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SMPD1P17405 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMPD1P17405 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMPD1P17405 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.28■□□□□ 0.68
SMPD1P17405 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.28■□□□□ 0.68
SMPD1P17405 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMPD1P17405 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms