Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRKCAP17252 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRKCAP17252 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRKCAP17252 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRKCAP17252 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRKCAP17252 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRKCAP17252 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRKCAP17252 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRKCAP17252 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRKCAP17252 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRKCAP17252 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRKCAP17252 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PRKCAP17252 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.23■□□□□ 0.19
PRKCAP17252 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRKCAP17252 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
PRKCAP17252 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRKCAP17252 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRKCAP17252 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PRKCAP17252 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRKCAP17252 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PRKCAP17252 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRKCAP17252 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRKCAP17252 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRKCAP17252 AC069148.1-201ENST00000608741 768 ntBASIC16.23■□□□□ 0.19
PRKCAP17252 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRKCAP17252 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRKCAP17252 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.23■□□□□ 0.19
PRKCAP17252 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRKCAP17252 AL645608.8-201ENST00000606034 2086 ntBASIC16.23■□□□□ 0.19
PRKCAP17252 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRKCAP17252 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.23■□□□□ 0.19
PRKCAP17252 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.23■□□□□ 0.19
PRKCAP17252 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRKCAP17252 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRKCAP17252 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.22■□□□□ 0.19
PRKCAP17252 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.22■□□□□ 0.19
PRKCAP17252 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRKCAP17252 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
PRKCAP17252 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRKCAP17252 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRKCAP17252 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.22■□□□□ 0.19
PRKCAP17252 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.22■□□□□ 0.19
PRKCAP17252 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRKCAP17252 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRKCAP17252 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRKCAP17252 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.22■□□□□ 0.19
PRKCAP17252 NKILA-202ENST00000614771 2598 ntBASIC16.22■□□□□ 0.19
PRKCAP17252 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRKCAP17252 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRKCAP17252 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRKCAP17252 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.22■□□□□ 0.19
PRKCAP17252 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRKCAP17252 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRKCAP17252 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRKCAP17252 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.22■□□□□ 0.19
PRKCAP17252 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.22■□□□□ 0.19
PRKCAP17252 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.22■□□□□ 0.19
PRKCAP17252 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PRKCAP17252 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.22■□□□□ 0.19
PRKCAP17252 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRKCAP17252 AL353801.3-201ENST00000609898 542 ntBASIC16.22■□□□□ 0.19
PRKCAP17252 AC116407.2-201ENST00000613639 860 ntBASIC16.22■□□□□ 0.19
PRKCAP17252 AC011676.5-201ENST00000624864 2660 ntBASIC16.22■□□□□ 0.19
PRKCAP17252 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PRKCAP17252 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRKCAP17252 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRKCAP17252 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRKCAP17252 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.22■□□□□ 0.19
PRKCAP17252 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRKCAP17252 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PRKCAP17252 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.22■□□□□ 0.19
PRKCAP17252 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRKCAP17252 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.22■□□□□ 0.19
PRKCAP17252 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PRKCAP17252 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PRKCAP17252 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRKCAP17252 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRKCAP17252 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRKCAP17252 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRKCAP17252 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
PRKCAP17252 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PRKCAP17252 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRKCAP17252 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRKCAP17252 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRKCAP17252 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRKCAP17252 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PRKCAP17252 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRKCAP17252 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRKCAP17252 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRKCAP17252 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRKCAP17252 AL845331.1-201ENST00000424978 1190 ntBASIC16.21■□□□□ 0.19
PRKCAP17252 AP002383.4-201ENST00000442518 975 ntBASIC16.21■□□□□ 0.19
PRKCAP17252 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
PRKCAP17252 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRKCAP17252 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRKCAP17252 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRKCAP17252 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.21■□□□□ 0.19
PRKCAP17252 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRKCAP17252 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
PRKCAP17252 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms