Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
DEFA4P12838 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.25□□□□□ -0.13
DEFA4P12838 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DEFA4P12838 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.25□□□□□ -0.13
DEFA4P12838 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
DEFA4P12838 FAM8A6P-201ENST00000407496 1135 ntBASIC14.25□□□□□ -0.13
DEFA4P12838 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.25□□□□□ -0.13
DEFA4P12838 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.25□□□□□ -0.13
DEFA4P12838 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
DEFA4P12838 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.25□□□□□ -0.13
DEFA4P12838 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.25□□□□□ -0.13
DEFA4P12838 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DEFA4P12838 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
DEFA4P12838 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
DEFA4P12838 AL138966.2-201ENST00000621997 464 ntBASIC14.25□□□□□ -0.13
DEFA4P12838 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DEFA4P12838 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DEFA4P12838 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.25□□□□□ -0.13
DEFA4P12838 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DEFA4P12838 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
DEFA4P12838 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
DEFA4P12838 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DEFA4P12838 AC008741.2-201ENST00000612792 3115 ntBASIC14.25□□□□□ -0.13
DEFA4P12838 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DEFA4P12838 AL118508.1-201ENST00000613502 2345 ntBASIC14.25□□□□□ -0.13
DEFA4P12838 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
DEFA4P12838 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DEFA4P12838 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DEFA4P12838 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.25□□□□□ -0.13
DEFA4P12838 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DEFA4P12838 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
DEFA4P12838 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
DEFA4P12838 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.24□□□□□ -0.13
DEFA4P12838 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DEFA4P12838 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
DEFA4P12838 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DEFA4P12838 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DEFA4P12838 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DEFA4P12838 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.24□□□□□ -0.13
DEFA4P12838 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DEFA4P12838 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
DEFA4P12838 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.24□□□□□ -0.13
DEFA4P12838 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DEFA4P12838 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
DEFA4P12838 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DEFA4P12838 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DEFA4P12838 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DEFA4P12838 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
DEFA4P12838 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.24□□□□□ -0.13
DEFA4P12838 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.24□□□□□ -0.13
DEFA4P12838 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DEFA4P12838 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
DEFA4P12838 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
DEFA4P12838 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DEFA4P12838 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DEFA4P12838 AC113347.1-201ENST00000413321 391 ntBASIC14.24□□□□□ -0.13
DEFA4P12838 BX664615.1-201ENST00000443558 458 ntBASIC14.24□□□□□ -0.13
DEFA4P12838 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
DEFA4P12838 AC010203.1-204ENST00000548782 407 ntBASIC14.24□□□□□ -0.13
DEFA4P12838 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.24□□□□□ -0.13
DEFA4P12838 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.24□□□□□ -0.13
DEFA4P12838 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.24□□□□□ -0.13
DEFA4P12838 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
DEFA4P12838 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DEFA4P12838 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
DEFA4P12838 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DEFA4P12838 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
DEFA4P12838 AC068587.6-202ENST00000641839 5619 ntBASIC14.24□□□□□ -0.13
DEFA4P12838 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
DEFA4P12838 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.24□□□□□ -0.13
DEFA4P12838 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DEFA4P12838 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.24□□□□□ -0.13
DEFA4P12838 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
DEFA4P12838 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.24□□□□□ -0.13
DEFA4P12838 CICP6-201ENST00000457191 2729 ntBASIC14.24□□□□□ -0.13
DEFA4P12838 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
DEFA4P12838 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.24□□□□□ -0.13
DEFA4P12838 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DEFA4P12838 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DEFA4P12838 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DEFA4P12838 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DEFA4P12838 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
DEFA4P12838 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DEFA4P12838 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.23□□□□□ -0.13
DEFA4P12838 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
DEFA4P12838 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DEFA4P12838 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DEFA4P12838 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.23□□□□□ -0.13
DEFA4P12838 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DEFA4P12838 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DEFA4P12838 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.23□□□□□ -0.13
DEFA4P12838 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
DEFA4P12838 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DEFA4P12838 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
DEFA4P12838 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DEFA4P12838 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DEFA4P12838 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.23□□□□□ -0.13
DEFA4P12838 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DEFA4P12838 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.23□□□□□ -0.13
DEFA4P12838 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms