Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RBP1P09455 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RBP1P09455 LINC02012-201ENST00000608206 1725 ntBASIC17.23■□□□□ 0.35
RBP1P09455 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RBP1P09455 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RBP1P09455 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.23■□□□□ 0.35
RBP1P09455 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.23■□□□□ 0.35
RBP1P09455 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RBP1P09455 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RBP1P09455 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RBP1P09455 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RBP1P09455 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.23■□□□□ 0.35
RBP1P09455 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.23■□□□□ 0.35
RBP1P09455 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.23■□□□□ 0.35
RBP1P09455 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RBP1P09455 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RBP1P09455 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.22■□□□□ 0.35
RBP1P09455 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RBP1P09455 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RBP1P09455 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RBP1P09455 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RBP1P09455 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RBP1P09455 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RBP1P09455 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
RBP1P09455 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RBP1P09455 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.22■□□□□ 0.35
RBP1P09455 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RBP1P09455 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RBP1P09455 AC060834.1-201ENST00000443027 2032 ntBASIC17.22■□□□□ 0.35
RBP1P09455 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RBP1P09455 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RBP1P09455 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RBP1P09455 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.22■□□□□ 0.35
RBP1P09455 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RBP1P09455 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RBP1P09455 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RBP1P09455 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.22■□□□□ 0.35
RBP1P09455 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.22■□□□□ 0.35
RBP1P09455 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.22■□□□□ 0.35
RBP1P09455 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RBP1P09455 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RBP1P09455 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RBP1P09455 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RBP1P09455 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RBP1P09455 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RBP1P09455 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RBP1P09455 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RBP1P09455 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RBP1P09455 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RBP1P09455 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RBP1P09455 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RBP1P09455 AC093525.9-201ENST00000624961 1746 ntBASIC17.21■□□□□ 0.35
RBP1P09455 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RBP1P09455 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RBP1P09455 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
RBP1P09455 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RBP1P09455 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RBP1P09455 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RBP1P09455 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RBP1P09455 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RBP1P09455 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.21■□□□□ 0.35
RBP1P09455 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RBP1P09455 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.21■□□□□ 0.35
RBP1P09455 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RBP1P09455 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RBP1P09455 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.21■□□□□ 0.35
RBP1P09455 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.21■□□□□ 0.35
RBP1P09455 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RBP1P09455 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.21■□□□□ 0.35
RBP1P09455 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.21■□□□□ 0.35
RBP1P09455 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
RBP1P09455 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RBP1P09455 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RBP1P09455 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RBP1P09455 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RBP1P09455 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RBP1P09455 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RBP1P09455 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.21■□□□□ 0.35
RBP1P09455 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RBP1P09455 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RBP1P09455 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.21■□□□□ 0.35
RBP1P09455 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RBP1P09455 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
RBP1P09455 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RBP1P09455 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RBP1P09455 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RBP1P09455 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.2■□□□□ 0.34
RBP1P09455 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RBP1P09455 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RBP1P09455 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
RBP1P09455 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.2■□□□□ 0.34
RBP1P09455 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.2■□□□□ 0.34
RBP1P09455 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RBP1P09455 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RBP1P09455 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RBP1P09455 AC124067.4-201ENST00000519691 2379 ntBASIC17.2■□□□□ 0.34
RBP1P09455 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RBP1P09455 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RBP1P09455 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RBP1P09455 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms