Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC026691.1-201ENST00000602502 2017 ntBASIC14.53□□□□□ -0.08
CTSDP07339 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CTSDP07339 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.53□□□□□ -0.08
CTSDP07339 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSDP07339 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSDP07339 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CTSDP07339 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSDP07339 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSDP07339 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSDP07339 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSDP07339 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSDP07339 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSDP07339 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.53□□□□□ -0.08
CTSDP07339 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSDP07339 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSDP07339 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSDP07339 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSDP07339 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.53□□□□□ -0.08
CTSDP07339 MIR718-201ENST00000390190 70 ntBASIC14.53□□□□□ -0.08
CTSDP07339 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.53□□□□□ -0.08
CTSDP07339 AC012618.2-201ENST00000428058 849 ntBASIC14.53□□□□□ -0.08
CTSDP07339 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.53□□□□□ -0.08
CTSDP07339 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSDP07339 AC008550.1-201ENST00000511500 884 ntBASIC14.53□□□□□ -0.08
CTSDP07339 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.53□□□□□ -0.08
CTSDP07339 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.53□□□□□ -0.08
CTSDP07339 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.53□□□□□ -0.08
CTSDP07339 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.53□□□□□ -0.08
CTSDP07339 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CTSDP07339 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CTSDP07339 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSDP07339 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSDP07339 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSDP07339 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSDP07339 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CTSDP07339 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSDP07339 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSDP07339 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSDP07339 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
CTSDP07339 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CTSDP07339 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSDP07339 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.53□□□□□ -0.08
CTSDP07339 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSDP07339 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CTSDP07339 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CTSDP07339 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.52□□□□□ -0.08
CTSDP07339 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CTSDP07339 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CTSDP07339 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CTSDP07339 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CTSDP07339 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CTSDP07339 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.52□□□□□ -0.08
CTSDP07339 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.52□□□□□ -0.08
CTSDP07339 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.52□□□□□ -0.08
CTSDP07339 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CTSDP07339 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CTSDP07339 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CTSDP07339 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.52□□□□□ -0.09
CTSDP07339 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CTSDP07339 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CTSDP07339 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.52□□□□□ -0.09
CTSDP07339 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.52□□□□□ -0.09
CTSDP07339 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
CTSDP07339 SLC25A1P3-201ENST00000395415 828 ntBASIC14.52□□□□□ -0.09
CTSDP07339 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.52□□□□□ -0.09
CTSDP07339 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.52□□□□□ -0.09
CTSDP07339 AC233702.5-201ENST00000584107 538 ntBASIC14.52□□□□□ -0.09
CTSDP07339 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CTSDP07339 Z99916.2-201ENST00000604037 246 ntBASIC14.52□□□□□ -0.09
CTSDP07339 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CTSDP07339 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CTSDP07339 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CTSDP07339 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CTSDP07339 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CTSDP07339 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CTSDP07339 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CTSDP07339 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
CTSDP07339 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CTSDP07339 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CTSDP07339 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.52□□□□□ -0.09
CTSDP07339 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.52□□□□□ -0.09
CTSDP07339 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CTSDP07339 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CTSDP07339 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CTSDP07339 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
CTSDP07339 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.52□□□□□ -0.09
CTSDP07339 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CTSDP07339 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CTSDP07339 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CTSDP07339 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CTSDP07339 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CTSDP07339 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CTSDP07339 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CTSDP07339 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
CTSDP07339 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
CTSDP07339 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CTSDP07339 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.51□□□□□ -0.09
CTSDP07339 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
CTSDP07339 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.51□□□□□ -0.09
CTSDP07339 KRT89P-201ENST00000620027 1478 ntBASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms