Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFAP04085 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFAP04085 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFAP04085 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFAP04085 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PDGFAP04085 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFAP04085 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFAP04085 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PDGFAP04085 AC079776.2-201ENST00000641154 1609 ntBASIC16.35■□□□□ 0.21
PDGFAP04085 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFAP04085 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFAP04085 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFAP04085 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.35■□□□□ 0.21
PDGFAP04085 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.35■□□□□ 0.21
PDGFAP04085 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFAP04085 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFAP04085 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.35■□□□□ 0.21
PDGFAP04085 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.35■□□□□ 0.21
PDGFAP04085 KRT18P27-201ENST00000427733 1299 ntBASIC16.35■□□□□ 0.21
PDGFAP04085 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.35■□□□□ 0.21
PDGFAP04085 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.35■□□□□ 0.21
PDGFAP04085 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFAP04085 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.35■□□□□ 0.21
PDGFAP04085 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.35■□□□□ 0.21
PDGFAP04085 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.35■□□□□ 0.21
PDGFAP04085 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.35■□□□□ 0.21
PDGFAP04085 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.35■□□□□ 0.21
PDGFAP04085 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFAP04085 AC064836.3-201ENST00000607928 673 ntBASIC16.35■□□□□ 0.21
PDGFAP04085 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFAP04085 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFAP04085 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PDGFAP04085 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.35■□□□□ 0.21
PDGFAP04085 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFAP04085 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFAP04085 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFAP04085 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFAP04085 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFAP04085 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFAP04085 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PDGFAP04085 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFAP04085 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PDGFAP04085 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFAP04085 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PDGFAP04085 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFAP04085 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFAP04085 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.34■□□□□ 0.21
PDGFAP04085 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFAP04085 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
PDGFAP04085 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFAP04085 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PDGFAP04085 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFAP04085 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.34■□□□□ 0.21
PDGFAP04085 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFAP04085 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
PDGFAP04085 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFAP04085 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.34■□□□□ 0.21
PDGFAP04085 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.34■□□□□ 0.21
PDGFAP04085 AC073621.1-201ENST00000392730 636 ntBASIC16.34■□□□□ 0.21
PDGFAP04085 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.34■□□□□ 0.21
PDGFAP04085 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.34■□□□□ 0.21
PDGFAP04085 KRT18P2-201ENST00000447938 1258 ntBASIC16.34■□□□□ 0.21
PDGFAP04085 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.34■□□□□ 0.21
PDGFAP04085 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.34■□□□□ 0.21
PDGFAP04085 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.34■□□□□ 0.21
PDGFAP04085 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFAP04085 AL022326.1-202ENST00000641533 845 ntBASIC16.34■□□□□ 0.21
PDGFAP04085 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PDGFAP04085 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFAP04085 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.34■□□□□ 0.21
PDGFAP04085 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.34■□□□□ 0.21
PDGFAP04085 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.34■□□□□ 0.21
PDGFAP04085 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFAP04085 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.34■□□□□ 0.21
PDGFAP04085 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFAP04085 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.34■□□□□ 0.21
PDGFAP04085 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFAP04085 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.34■□□□□ 0.21
PDGFAP04085 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PDGFAP04085 AL513477.1-201ENST00000602865 2407 ntBASIC16.34■□□□□ 0.21
PDGFAP04085 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PDGFAP04085 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
PDGFAP04085 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PDGFAP04085 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PDGFAP04085 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
PDGFAP04085 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
PDGFAP04085 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PDGFAP04085 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PDGFAP04085 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.33■□□□□ 0.21
PDGFAP04085 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PDGFAP04085 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFAP04085 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFAP04085 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
PDGFAP04085 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFAP04085 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.33■□□□□ 0.2
PDGFAP04085 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PDGFAP04085 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PDGFAP04085 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PDGFAP04085 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PDGFAP04085 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms