Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC20.05■□□□□ 0.8
MBD3O95983 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD3O95983 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD3O95983 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MBD3O95983 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MBD3O95983 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MBD3O95983 AC011270.2-201ENST00000624293 2550 ntBASIC20.04■□□□□ 0.8
MBD3O95983 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.04■□□□□ 0.8
MBD3O95983 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MBD3O95983 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MBD3O95983 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MBD3O95983 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MBD3O95983 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.04■□□□□ 0.8
MBD3O95983 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.04■□□□□ 0.8
MBD3O95983 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MBD3O95983 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
MBD3O95983 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MBD3O95983 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MBD3O95983 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
MBD3O95983 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC20.04■□□□□ 0.8
MBD3O95983 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC20.04■□□□□ 0.8
MBD3O95983 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MBD3O95983 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
MBD3O95983 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MBD3O95983 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MBD3O95983 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MBD3O95983 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20.03■□□□□ 0.8
MBD3O95983 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC20.03■□□□□ 0.8
MBD3O95983 AC022188.1-201ENST00000620960 1664 ntBASIC20.03■□□□□ 0.8
MBD3O95983 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD3O95983 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD3O95983 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MBD3O95983 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
MBD3O95983 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD3O95983 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD3O95983 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC20.03■□□□□ 0.8
MBD3O95983 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD3O95983 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD3O95983 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
MBD3O95983 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MBD3O95983 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.03■□□□□ 0.8
MBD3O95983 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD3O95983 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
MBD3O95983 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC20.03■□□□□ 0.8
MBD3O95983 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.03■□□□□ 0.8
MBD3O95983 RPS2P55-201ENST00000397318 883 ntBASIC20.03■□□□□ 0.8
MBD3O95983 AC002558.1-201ENST00000488906 803 ntBASIC20.03■□□□□ 0.8
MBD3O95983 AC107956.1-201ENST00000494359 873 ntBASIC20.03■□□□□ 0.8
MBD3O95983 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.03■□□□□ 0.8
MBD3O95983 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
MBD3O95983 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.03■□□□□ 0.8
MBD3O95983 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.03■□□□□ 0.8
MBD3O95983 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MBD3O95983 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MBD3O95983 AC009154.2-201ENST00000621177 724 ntBASIC20.03■□□□□ 0.8
MBD3O95983 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MBD3O95983 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.03■□□□□ 0.8
MBD3O95983 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MBD3O95983 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD3O95983 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD3O95983 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD3O95983 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD3O95983 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
MBD3O95983 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.03■□□□□ 0.8
MBD3O95983 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD3O95983 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
MBD3O95983 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MBD3O95983 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MBD3O95983 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
MBD3O95983 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
MBD3O95983 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
MBD3O95983 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.02■□□□□ 0.8
MBD3O95983 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MBD3O95983 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MBD3O95983 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MBD3O95983 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.02■□□□□ 0.8
MBD3O95983 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
MBD3O95983 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC20.02■□□□□ 0.8
MBD3O95983 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
MBD3O95983 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
MBD3O95983 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MBD3O95983 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
MBD3O95983 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MBD3O95983 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MBD3O95983 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MBD3O95983 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
MBD3O95983 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MBD3O95983 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.02■□□□□ 0.8
MBD3O95983 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
MBD3O95983 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MBD3O95983 AC009947.2-201ENST00000444014 672 ntBASIC20.02■□□□□ 0.8
MBD3O95983 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MBD3O95983 AC112698.1-201ENST00000510299 916 ntBASIC20.02■□□□□ 0.8
MBD3O95983 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.02■□□□□ 0.8
MBD3O95983 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.02■□□□□ 0.8
MBD3O95983 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.02■□□□□ 0.8
MBD3O95983 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.02■□□□□ 0.8
MBD3O95983 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.02■□□□□ 0.8
MBD3O95983 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.02■□□□□ 0.8
MBD3O95983 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms