Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.56■□□□□ 0.08
CNOT4O95628 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNOT4O95628 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNOT4O95628 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CNOT4O95628 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.56■□□□□ 0.08
CNOT4O95628 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.56■□□□□ 0.08
CNOT4O95628 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CNOT4O95628 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CNOT4O95628 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNOT4O95628 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CNOT4O95628 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNOT4O95628 AL133373.2-201ENST00000623187 2828 ntBASIC15.56■□□□□ 0.08
CNOT4O95628 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CNOT4O95628 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT4O95628 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT4O95628 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CNOT4O95628 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT4O95628 PCDHB18P-201ENST00000524813 2368 ntBASIC15.55■□□□□ 0.08
CNOT4O95628 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.55■□□□□ 0.08
CNOT4O95628 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CNOT4O95628 NOC2LP1-202ENST00000452600 2235 ntBASIC15.55■□□□□ 0.08
CNOT4O95628 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT4O95628 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
CNOT4O95628 AC100803.2-201ENST00000562459 1963 ntBASIC15.55■□□□□ 0.08
CNOT4O95628 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT4O95628 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT4O95628 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.55■□□□□ 0.08
CNOT4O95628 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.55■□□□□ 0.08
CNOT4O95628 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT4O95628 AL353593.2-201ENST00000602529 1483 ntBASIC15.55■□□□□ 0.08
CNOT4O95628 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT4O95628 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT4O95628 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.55■□□□□ 0.08
CNOT4O95628 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT4O95628 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT4O95628 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CNOT4O95628 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.55■□□□□ 0.08
CNOT4O95628 MYCLP1-201ENST00000372451 1075 ntBASIC15.55■□□□□ 0.08
CNOT4O95628 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.55■□□□□ 0.08
CNOT4O95628 AC002558.1-201ENST00000488906 803 ntBASIC15.55■□□□□ 0.08
CNOT4O95628 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT4O95628 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CNOT4O95628 AF238378.1-201ENST00000526806 358 ntBASIC15.55■□□□□ 0.08
CNOT4O95628 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.55■□□□□ 0.08
CNOT4O95628 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.55■□□□□ 0.08
CNOT4O95628 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.55■□□□□ 0.08
CNOT4O95628 AL139288.1-201ENST00000623748 933 ntBASIC15.55■□□□□ 0.08
CNOT4O95628 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.55■□□□□ 0.08
CNOT4O95628 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT4O95628 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT4O95628 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT4O95628 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT4O95628 NOC2LP2-201ENST00000407594 1944 ntBASIC15.55■□□□□ 0.08
CNOT4O95628 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CNOT4O95628 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT4O95628 AC009949.1-201ENST00000623048 1830 ntBASIC15.54■□□□□ 0.08
CNOT4O95628 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.54■□□□□ 0.08
CNOT4O95628 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT4O95628 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.54■□□□□ 0.08
CNOT4O95628 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT4O95628 PMPCAP1-201ENST00000508114 1576 ntBASIC15.54■□□□□ 0.08
CNOT4O95628 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT4O95628 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT4O95628 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT4O95628 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CNOT4O95628 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT4O95628 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT4O95628 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CNOT4O95628 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CNOT4O95628 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.54■□□□□ 0.08
CNOT4O95628 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CNOT4O95628 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT4O95628 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT4O95628 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CNOT4O95628 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CNOT4O95628 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.54■□□□□ 0.08
CNOT4O95628 AC005104.2-201ENST00000427818 678 ntBASIC15.54■□□□□ 0.08
CNOT4O95628 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.54■□□□□ 0.08
CNOT4O95628 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.54■□□□□ 0.08
CNOT4O95628 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.54■□□□□ 0.08
CNOT4O95628 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT4O95628 MTDHP3-201ENST00000594186 672 ntBASIC15.54■□□□□ 0.08
CNOT4O95628 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT4O95628 AP001269.4-201ENST00000609611 512 ntBASIC15.54■□□□□ 0.08
CNOT4O95628 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT4O95628 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CNOT4O95628 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT4O95628 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.54■□□□□ 0.08
CNOT4O95628 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT4O95628 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT4O95628 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.54■□□□□ 0.08
CNOT4O95628 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CNOT4O95628 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.54■□□□□ 0.08
CNOT4O95628 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.54■□□□□ 0.08
CNOT4O95628 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CNOT4O95628 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.54■□□□□ 0.08
CNOT4O95628 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.54■□□□□ 0.08
CNOT4O95628 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNOT4O95628 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT4O95628 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms