Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.82■□□□□ 0.92
MBD4O95243 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.82■□□□□ 0.92
MBD4O95243 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.82■□□□□ 0.92
MBD4O95243 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.82■□□□□ 0.92
MBD4O95243 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.82■□□□□ 0.92
MBD4O95243 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
MBD4O95243 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
MBD4O95243 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MBD4O95243 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
MBD4O95243 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MBD4O95243 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MBD4O95243 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MBD4O95243 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MBD4O95243 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MBD4O95243 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
MBD4O95243 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MBD4O95243 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
MBD4O95243 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
MBD4O95243 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MBD4O95243 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MBD4O95243 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MBD4O95243 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MBD4O95243 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.81■□□□□ 0.92
MBD4O95243 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
MBD4O95243 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.81■□□□□ 0.92
MBD4O95243 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.81■□□□□ 0.92
MBD4O95243 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.81■□□□□ 0.92
MBD4O95243 RPL13AP23-201ENST00000480739 586 ntBASIC20.81■□□□□ 0.92
MBD4O95243 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MBD4O95243 AC136632.2-201ENST00000512891 861 ntBASIC20.81■□□□□ 0.92
MBD4O95243 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
MBD4O95243 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.81■□□□□ 0.92
MBD4O95243 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.81■□□□□ 0.92
MBD4O95243 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MBD4O95243 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.81■□□□□ 0.92
MBD4O95243 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
MBD4O95243 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
MBD4O95243 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
MBD4O95243 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MBD4O95243 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MBD4O95243 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
MBD4O95243 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
MBD4O95243 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.8■□□□□ 0.92
MBD4O95243 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MBD4O95243 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
MBD4O95243 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.8■□□□□ 0.92
MBD4O95243 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MBD4O95243 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.8■□□□□ 0.92
MBD4O95243 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.8■□□□□ 0.92
MBD4O95243 RNA5SP415-201ENST00000517246 115 ntBASIC20.8■□□□□ 0.92
MBD4O95243 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MBD4O95243 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.8■□□□□ 0.92
MBD4O95243 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.8■□□□□ 0.92
MBD4O95243 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.8■□□□□ 0.92
MBD4O95243 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.8■□□□□ 0.92
MBD4O95243 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.8■□□□□ 0.92
MBD4O95243 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.8■□□□□ 0.92
MBD4O95243 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
MBD4O95243 AL353135.1-201ENST00000606729 504 ntBASIC20.8■□□□□ 0.92
MBD4O95243 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
MBD4O95243 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MBD4O95243 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MBD4O95243 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MBD4O95243 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MBD4O95243 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.8■□□□□ 0.92
MBD4O95243 BCL2-203ENST00000589955 5011 ntBASIC20.8■□□□□ 0.92
MBD4O95243 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
MBD4O95243 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.8■□□□□ 0.92
MBD4O95243 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MBD4O95243 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
MBD4O95243 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
MBD4O95243 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
MBD4O95243 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
MBD4O95243 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MBD4O95243 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MBD4O95243 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MBD4O95243 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MBD4O95243 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MBD4O95243 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MBD4O95243 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
MBD4O95243 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
MBD4O95243 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.79■□□□□ 0.92
MBD4O95243 MIR1199-201ENST00000621445 119 ntBASIC20.79■□□□□ 0.92
MBD4O95243 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MBD4O95243 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MBD4O95243 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.79■□□□□ 0.92
MBD4O95243 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
MBD4O95243 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MBD4O95243 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MBD4O95243 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
MBD4O95243 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.79■□□□□ 0.92
MBD4O95243 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
MBD4O95243 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MBD4O95243 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MBD4O95243 AC104109.2-201ENST00000602919 1418 ntBASIC20.78■□□□□ 0.92
MBD4O95243 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MBD4O95243 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
MBD4O95243 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MBD4O95243 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.78■□□□□ 0.92
MBD4O95243 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms