Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CEACAM4O75871 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CEACAM4O75871 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.75■□□□□ 0.11
CEACAM4O75871 TIMM8BP1-201ENST00000452384 211 ntBASIC15.75■□□□□ 0.11
CEACAM4O75871 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.75■□□□□ 0.11
CEACAM4O75871 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CEACAM4O75871 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.75■□□□□ 0.11
CEACAM4O75871 AC107918.2-201ENST00000530817 355 ntBASIC15.75■□□□□ 0.11
CEACAM4O75871 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.75■□□□□ 0.11
CEACAM4O75871 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.75■□□□□ 0.11
CEACAM4O75871 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.75■□□□□ 0.11
CEACAM4O75871 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CEACAM4O75871 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.75■□□□□ 0.11
CEACAM4O75871 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CEACAM4O75871 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CEACAM4O75871 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.75■□□□□ 0.11
CEACAM4O75871 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
CEACAM4O75871 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CEACAM4O75871 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CEACAM4O75871 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CEACAM4O75871 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CEACAM4O75871 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC15.74■□□□□ 0.11
CEACAM4O75871 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CEACAM4O75871 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CEACAM4O75871 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CEACAM4O75871 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CEACAM4O75871 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.74■□□□□ 0.11
CEACAM4O75871 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.74■□□□□ 0.11
CEACAM4O75871 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CEACAM4O75871 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CEACAM4O75871 FAM86GP-201ENST00000448322 971 ntBASIC15.74■□□□□ 0.11
CEACAM4O75871 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.74■□□□□ 0.11
CEACAM4O75871 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.74■□□□□ 0.11
CEACAM4O75871 AC067863.1-201ENST00000494933 530 ntBASIC15.74■□□□□ 0.11
CEACAM4O75871 KRT8P48-201ENST00000515599 1220 ntBASIC15.74■□□□□ 0.11
CEACAM4O75871 AC005498.2-205ENST00000593218 784 ntBASIC15.74■□□□□ 0.11
CEACAM4O75871 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CEACAM4O75871 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CEACAM4O75871 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CEACAM4O75871 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CEACAM4O75871 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CEACAM4O75871 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CEACAM4O75871 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.74■□□□□ 0.11
CEACAM4O75871 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CEACAM4O75871 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CEACAM4O75871 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CEACAM4O75871 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CEACAM4O75871 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CEACAM4O75871 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CEACAM4O75871 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CEACAM4O75871 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CEACAM4O75871 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.73■□□□□ 0.11
CEACAM4O75871 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CEACAM4O75871 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CEACAM4O75871 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CEACAM4O75871 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CEACAM4O75871 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CEACAM4O75871 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CEACAM4O75871 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CEACAM4O75871 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CEACAM4O75871 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CEACAM4O75871 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CEACAM4O75871 SPDYE11-202ENST00000450699 704 ntBASIC15.73■□□□□ 0.11
CEACAM4O75871 RN7SL589P-201ENST00000481268 310 ntBASIC15.73■□□□□ 0.11
CEACAM4O75871 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.73■□□□□ 0.11
CEACAM4O75871 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.73■□□□□ 0.11
CEACAM4O75871 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
CEACAM4O75871 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.73■□□□□ 0.11
CEACAM4O75871 SPDYE9P-201ENST00000570642 692 ntBASIC15.73■□□□□ 0.11
CEACAM4O75871 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.73■□□□□ 0.11
CEACAM4O75871 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.73■□□□□ 0.11
CEACAM4O75871 SPDYE10P-202ENST00000612005 668 ntBASIC15.73■□□□□ 0.11
CEACAM4O75871 SPDYE8P-202ENST00000612377 668 ntBASIC15.73■□□□□ 0.11
CEACAM4O75871 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.73■□□□□ 0.11
CEACAM4O75871 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
CEACAM4O75871 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CEACAM4O75871 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.73■□□□□ 0.11
CEACAM4O75871 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.73■□□□□ 0.11
CEACAM4O75871 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.73■□□□□ 0.11
CEACAM4O75871 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CEACAM4O75871 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CEACAM4O75871 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CEACAM4O75871 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CEACAM4O75871 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CEACAM4O75871 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.73■□□□□ 0.11
CEACAM4O75871 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
CEACAM4O75871 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.73■□□□□ 0.11
CEACAM4O75871 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.73■□□□□ 0.11
CEACAM4O75871 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CEACAM4O75871 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CEACAM4O75871 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CEACAM4O75871 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.72■□□□□ 0.11
CEACAM4O75871 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CEACAM4O75871 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.72■□□□□ 0.11
CEACAM4O75871 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CEACAM4O75871 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CEACAM4O75871 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CEACAM4O75871 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
CEACAM4O75871 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CEACAM4O75871 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms