Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 AL135999.2-201ENST00000622438 1686 ntBASIC17.83■□□□□ 0.45
CLDN11O75508 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
CLDN11O75508 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN11O75508 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.45
CLDN11O75508 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN11O75508 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN11O75508 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN11O75508 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CLDN11O75508 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CLDN11O75508 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.83■□□□□ 0.44
CLDN11O75508 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CLDN11O75508 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN11O75508 ACTG1P4-201ENST00000425123 1122 ntBASIC17.83■□□□□ 0.44
CLDN11O75508 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CLDN11O75508 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN11O75508 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.83■□□□□ 0.44
CLDN11O75508 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
CLDN11O75508 AC004706.3-202ENST00000621574 984 ntBASIC17.83■□□□□ 0.44
CLDN11O75508 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CLDN11O75508 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN11O75508 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN11O75508 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.83■□□□□ 0.44
CLDN11O75508 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN11O75508 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN11O75508 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN11O75508 AL138688.1-201ENST00000624851 1594 ntBASIC17.83■□□□□ 0.44
CLDN11O75508 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN11O75508 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN11O75508 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN11O75508 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN11O75508 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CLDN11O75508 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
CLDN11O75508 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN11O75508 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN11O75508 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN11O75508 LINC00982-205ENST00000420957 435 ntBASIC17.82■□□□□ 0.44
CLDN11O75508 KRT18P27-201ENST00000427733 1299 ntBASIC17.82■□□□□ 0.44
CLDN11O75508 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN11O75508 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.82■□□□□ 0.44
CLDN11O75508 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.82■□□□□ 0.44
CLDN11O75508 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN11O75508 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN11O75508 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.82■□□□□ 0.44
CLDN11O75508 AC012640.2-201ENST00000561606 901 ntBASIC17.82■□□□□ 0.44
CLDN11O75508 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN11O75508 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.82■□□□□ 0.44
CLDN11O75508 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.82■□□□□ 0.44
CLDN11O75508 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN11O75508 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.82■□□□□ 0.44
CLDN11O75508 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN11O75508 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
CLDN11O75508 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN11O75508 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN11O75508 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN11O75508 AC067852.2-201ENST00000590513 2313 ntBASIC17.82■□□□□ 0.44
CLDN11O75508 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CLDN11O75508 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN11O75508 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN11O75508 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN11O75508 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN11O75508 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.81■□□□□ 0.44
CLDN11O75508 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN11O75508 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN11O75508 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CLDN11O75508 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN11O75508 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN11O75508 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN11O75508 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CLDN11O75508 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN11O75508 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.81■□□□□ 0.44
CLDN11O75508 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN11O75508 AL139424.1-201ENST00000607572 797 ntBASIC17.81■□□□□ 0.44
CLDN11O75508 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.81■□□□□ 0.44
CLDN11O75508 BX640515.1-201ENST00000617215 977 ntBASIC17.81■□□□□ 0.44
CLDN11O75508 AC116407.3-201ENST00000623905 1129 ntBASIC17.81■□□□□ 0.44
CLDN11O75508 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
CLDN11O75508 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CLDN11O75508 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN11O75508 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN11O75508 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN11O75508 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN11O75508 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.81■□□□□ 0.44
CLDN11O75508 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN11O75508 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN11O75508 AC243591.1-201ENST00000452967 1364 ntBASIC17.8■□□□□ 0.44
CLDN11O75508 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN11O75508 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN11O75508 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN11O75508 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN11O75508 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN11O75508 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN11O75508 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN11O75508 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN11O75508 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.8■□□□□ 0.44
CLDN11O75508 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN11O75508 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.8■□□□□ 0.44
CLDN11O75508 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.8■□□□□ 0.44
CLDN11O75508 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
CLDN11O75508 AL353135.1-201ENST00000606729 504 ntBASIC17.8■□□□□ 0.44
CLDN11O75508 MIR1199-201ENST00000621445 119 ntBASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms