Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
PRAMEF11O60813 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF11O60813 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF11O60813 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF11O60813 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF11O60813 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF11O60813 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF11O60813 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF11O60813 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PRAMEF11O60813 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PRAMEF11O60813 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF11O60813 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PRAMEF11O60813 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
PRAMEF11O60813 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PRAMEF11O60813 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF11O60813 AC097637.2-201ENST00000624096 1997 ntBASIC17.7■□□□□ 0.42
PRAMEF11O60813 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF11O60813 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
PRAMEF11O60813 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.69■□□□□ 0.42
PRAMEF11O60813 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF11O60813 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF11O60813 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.69■□□□□ 0.42
PRAMEF11O60813 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF11O60813 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF11O60813 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF11O60813 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF11O60813 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF11O60813 AC141586.5-201ENST00000624546 2050 ntBASIC17.69■□□□□ 0.42
PRAMEF11O60813 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF11O60813 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.69■□□□□ 0.42
PRAMEF11O60813 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.69■□□□□ 0.42
PRAMEF11O60813 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.69■□□□□ 0.42
PRAMEF11O60813 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.69■□□□□ 0.42
PRAMEF11O60813 ACTG1P4-201ENST00000425123 1122 ntBASIC17.69■□□□□ 0.42
PRAMEF11O60813 KRT18P67-201ENST00000432816 1264 ntBASIC17.69■□□□□ 0.42
PRAMEF11O60813 AC018712.1-201ENST00000455767 687 ntBASIC17.69■□□□□ 0.42
PRAMEF11O60813 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF11O60813 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.69■□□□□ 0.42
PRAMEF11O60813 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.69■□□□□ 0.42
PRAMEF11O60813 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF11O60813 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.69■□□□□ 0.42
PRAMEF11O60813 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.69■□□□□ 0.42
PRAMEF11O60813 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.69■□□□□ 0.42
PRAMEF11O60813 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF11O60813 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF11O60813 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.69■□□□□ 0.42
PRAMEF11O60813 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF11O60813 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PRAMEF11O60813 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF11O60813 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.68■□□□□ 0.42
PRAMEF11O60813 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.68■□□□□ 0.42
PRAMEF11O60813 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PRAMEF11O60813 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF11O60813 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
PRAMEF11O60813 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF11O60813 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PRAMEF11O60813 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF11O60813 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PRAMEF11O60813 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PRAMEF11O60813 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PRAMEF11O60813 AF186996.4-201ENST00000467186 377 ntBASIC17.68■□□□□ 0.42
PRAMEF11O60813 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.68■□□□□ 0.42
PRAMEF11O60813 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.68■□□□□ 0.42
PRAMEF11O60813 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PRAMEF11O60813 AC064862.7-201ENST00000604520 867 ntBASIC17.68■□□□□ 0.42
PRAMEF11O60813 AL589182.2-201ENST00000619332 1049 ntBASIC17.68■□□□□ 0.42
PRAMEF11O60813 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF11O60813 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PRAMEF11O60813 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF11O60813 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF11O60813 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.68■□□□□ 0.42
PRAMEF11O60813 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF11O60813 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF11O60813 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF11O60813 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.68■□□□□ 0.42
PRAMEF11O60813 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF11O60813 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
PRAMEF11O60813 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.67■□□□□ 0.42
PRAMEF11O60813 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF11O60813 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PRAMEF11O60813 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF11O60813 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF11O60813 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF11O60813 NCF1C-201ENST00000438382 1427 ntBASIC17.67■□□□□ 0.42
PRAMEF11O60813 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF11O60813 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF11O60813 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PRAMEF11O60813 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF11O60813 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.67■□□□□ 0.42
PRAMEF11O60813 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.67■□□□□ 0.42
PRAMEF11O60813 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF11O60813 LINC00982-205ENST00000420957 435 ntBASIC17.67■□□□□ 0.42
PRAMEF11O60813 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.67■□□□□ 0.42
PRAMEF11O60813 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.67■□□□□ 0.42
PRAMEF11O60813 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.67■□□□□ 0.42
PRAMEF11O60813 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PRAMEF11O60813 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF11O60813 AC148477.8-201ENST00000624298 468 ntBASIC17.67■□□□□ 0.42
PRAMEF11O60813 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF11O60813 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms