Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EXTL3O43909 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.94■□□□□ 0.62
EXTL3O43909 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
EXTL3O43909 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
EXTL3O43909 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EXTL3O43909 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.94■□□□□ 0.62
EXTL3O43909 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
EXTL3O43909 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EXTL3O43909 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
EXTL3O43909 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
EXTL3O43909 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
EXTL3O43909 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EXTL3O43909 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
EXTL3O43909 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.93■□□□□ 0.62
EXTL3O43909 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EXTL3O43909 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EXTL3O43909 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.93■□□□□ 0.62
EXTL3O43909 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
EXTL3O43909 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.93■□□□□ 0.62
EXTL3O43909 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.93■□□□□ 0.62
EXTL3O43909 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.93■□□□□ 0.62
EXTL3O43909 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.93■□□□□ 0.62
EXTL3O43909 AC021087.4-201ENST00000563761 564 ntBASIC18.93■□□□□ 0.62
EXTL3O43909 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.93■□□□□ 0.62
EXTL3O43909 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EXTL3O43909 CROCCP2-202ENST00000412962 2773 ntBASIC18.93■□□□□ 0.62
EXTL3O43909 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EXTL3O43909 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
EXTL3O43909 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EXTL3O43909 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EXTL3O43909 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.93■□□□□ 0.62
EXTL3O43909 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EXTL3O43909 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.93■□□□□ 0.62
EXTL3O43909 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EXTL3O43909 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EXTL3O43909 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.92■□□□□ 0.62
EXTL3O43909 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
EXTL3O43909 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EXTL3O43909 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
EXTL3O43909 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.92■□□□□ 0.62
EXTL3O43909 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EXTL3O43909 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EXTL3O43909 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EXTL3O43909 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
EXTL3O43909 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.92■□□□□ 0.62
EXTL3O43909 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.92■□□□□ 0.62
EXTL3O43909 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.92■□□□□ 0.62
EXTL3O43909 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.92■□□□□ 0.62
EXTL3O43909 AL160237.2-201ENST00000556165 472 ntBASIC18.92■□□□□ 0.62
EXTL3O43909 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.92■□□□□ 0.62
EXTL3O43909 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
EXTL3O43909 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
EXTL3O43909 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.92■□□□□ 0.62
EXTL3O43909 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
EXTL3O43909 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.92■□□□□ 0.62
EXTL3O43909 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.92■□□□□ 0.62
EXTL3O43909 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
EXTL3O43909 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
EXTL3O43909 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EXTL3O43909 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EXTL3O43909 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
EXTL3O43909 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EXTL3O43909 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.92■□□□□ 0.62
EXTL3O43909 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
EXTL3O43909 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EXTL3O43909 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EXTL3O43909 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
EXTL3O43909 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.91■□□□□ 0.62
EXTL3O43909 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EXTL3O43909 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EXTL3O43909 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.91■□□□□ 0.62
EXTL3O43909 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EXTL3O43909 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EXTL3O43909 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EXTL3O43909 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EXTL3O43909 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
EXTL3O43909 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
EXTL3O43909 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.91■□□□□ 0.62
EXTL3O43909 AL022342.1-201ENST00000400363 863 ntBASIC18.91■□□□□ 0.62
EXTL3O43909 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
EXTL3O43909 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.91■□□□□ 0.62
EXTL3O43909 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.91■□□□□ 0.62
EXTL3O43909 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.91■□□□□ 0.62
EXTL3O43909 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.91■□□□□ 0.62
EXTL3O43909 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.91■□□□□ 0.62
EXTL3O43909 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.91■□□□□ 0.62
EXTL3O43909 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
EXTL3O43909 MTDHP4-201ENST00000600287 670 ntBASIC18.91■□□□□ 0.62
EXTL3O43909 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.91■□□□□ 0.62
EXTL3O43909 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EXTL3O43909 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
EXTL3O43909 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
EXTL3O43909 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
EXTL3O43909 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
EXTL3O43909 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EXTL3O43909 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.91■□□□□ 0.62
EXTL3O43909 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.91■□□□□ 0.62
EXTL3O43909 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.91■□□□□ 0.62
EXTL3O43909 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EXTL3O43909 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms