Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RRP8O43159 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RRP8O43159 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RRP8O43159 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RRP8O43159 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RRP8O43159 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.38■□□□□ 0.21
RRP8O43159 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RRP8O43159 AC236430.1-201ENST00000402231 743 ntBASIC16.38■□□□□ 0.21
RRP8O43159 TSPY16P-201ENST00000449843 468 ntBASIC16.38■□□□□ 0.21
RRP8O43159 GAPDHP21-201ENST00000450301 1010 ntBASIC16.38■□□□□ 0.21
RRP8O43159 TIMM8BP1-201ENST00000452384 211 ntBASIC16.38■□□□□ 0.21
RRP8O43159 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RRP8O43159 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RRP8O43159 CXCL1P1-201ENST00000502804 216 ntBASIC16.38■□□□□ 0.21
RRP8O43159 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.38■□□□□ 0.21
RRP8O43159 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.38■□□□□ 0.21
RRP8O43159 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.38■□□□□ 0.21
RRP8O43159 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.38■□□□□ 0.21
RRP8O43159 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.38■□□□□ 0.21
RRP8O43159 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RRP8O43159 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RRP8O43159 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RRP8O43159 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RRP8O43159 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RRP8O43159 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RRP8O43159 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RRP8O43159 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RRP8O43159 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RRP8O43159 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.38■□□□□ 0.21
RRP8O43159 GMCL1P1-201ENST00000463439 1581 ntBASIC16.38■□□□□ 0.21
RRP8O43159 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.38■□□□□ 0.21
RRP8O43159 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RRP8O43159 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.38■□□□□ 0.21
RRP8O43159 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RRP8O43159 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.37■□□□□ 0.21
RRP8O43159 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RRP8O43159 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RRP8O43159 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RRP8O43159 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.37■□□□□ 0.21
RRP8O43159 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RRP8O43159 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RRP8O43159 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.37■□□□□ 0.21
RRP8O43159 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
RRP8O43159 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.37■□□□□ 0.21
RRP8O43159 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RRP8O43159 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RRP8O43159 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RRP8O43159 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RRP8O43159 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.37■□□□□ 0.21
RRP8O43159 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RRP8O43159 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
RRP8O43159 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RRP8O43159 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RRP8O43159 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RRP8O43159 AC005237.2-201ENST00000434368 219 ntBASIC16.37■□□□□ 0.21
RRP8O43159 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.37■□□□□ 0.21
RRP8O43159 AC002472.2-201ENST00000442739 958 ntBASIC16.37■□□□□ 0.21
RRP8O43159 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RRP8O43159 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.37■□□□□ 0.21
RRP8O43159 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RRP8O43159 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.37■□□□□ 0.21
RRP8O43159 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.37■□□□□ 0.21
RRP8O43159 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.37■□□□□ 0.21
RRP8O43159 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.37■□□□□ 0.21
RRP8O43159 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.37■□□□□ 0.21
RRP8O43159 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.37■□□□□ 0.21
RRP8O43159 AL390955.2-201ENST00000603032 514 ntBASIC16.37■□□□□ 0.21
RRP8O43159 AC009093.7-201ENST00000623853 1223 ntBASIC16.37■□□□□ 0.21
RRP8O43159 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.37■□□□□ 0.21
RRP8O43159 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RRP8O43159 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.37■□□□□ 0.21
RRP8O43159 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RRP8O43159 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RRP8O43159 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RRP8O43159 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.37■□□□□ 0.21
RRP8O43159 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RRP8O43159 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RRP8O43159 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RRP8O43159 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RRP8O43159 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
RRP8O43159 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RRP8O43159 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RRP8O43159 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RRP8O43159 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.36■□□□□ 0.21
RRP8O43159 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RRP8O43159 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.36■□□□□ 0.21
RRP8O43159 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RRP8O43159 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
RRP8O43159 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RRP8O43159 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RRP8O43159 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RRP8O43159 AL161938.1-201ENST00000569833 2180 ntBASIC16.36■□□□□ 0.21
RRP8O43159 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RRP8O43159 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RRP8O43159 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RRP8O43159 AL627223.1-201ENST00000416693 442 ntBASIC16.36■□□□□ 0.21
RRP8O43159 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.36■□□□□ 0.21
RRP8O43159 AC055876.3-201ENST00000431496 288 ntBASIC16.36■□□□□ 0.21
RRP8O43159 FAM86C2P-203ENST00000528684 1004 ntBASIC16.36■□□□□ 0.21
RRP8O43159 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms