Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
COLCA2A8K830 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COLCA2A8K830 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
COLCA2A8K830 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
COLCA2A8K830 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COLCA2A8K830 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.4□□□□□ -0.26
COLCA2A8K830 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.4□□□□□ -0.26
COLCA2A8K830 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COLCA2A8K830 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COLCA2A8K830 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COLCA2A8K830 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COLCA2A8K830 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
COLCA2A8K830 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COLCA2A8K830 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
COLCA2A8K830 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
COLCA2A8K830 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COLCA2A8K830 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
COLCA2A8K830 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COLCA2A8K830 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
COLCA2A8K830 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.39□□□□□ -0.27
COLCA2A8K830 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
COLCA2A8K830 RCC2P3-201ENST00000418112 1537 ntBASIC13.39□□□□□ -0.27
COLCA2A8K830 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
COLCA2A8K830 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.39□□□□□ -0.27
COLCA2A8K830 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
COLCA2A8K830 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
COLCA2A8K830 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COLCA2A8K830 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.39□□□□□ -0.27
COLCA2A8K830 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
COLCA2A8K830 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COLCA2A8K830 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
COLCA2A8K830 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
COLCA2A8K830 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COLCA2A8K830 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COLCA2A8K830 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.39□□□□□ -0.27
COLCA2A8K830 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
COLCA2A8K830 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COLCA2A8K830 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
COLCA2A8K830 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.39□□□□□ -0.27
COLCA2A8K830 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
COLCA2A8K830 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
COLCA2A8K830 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
COLCA2A8K830 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC13.39□□□□□ -0.27
COLCA2A8K830 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COLCA2A8K830 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC13.39□□□□□ -0.27
COLCA2A8K830 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COLCA2A8K830 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC13.39□□□□□ -0.27
COLCA2A8K830 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
COLCA2A8K830 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.39□□□□□ -0.27
COLCA2A8K830 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.39□□□□□ -0.27
COLCA2A8K830 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.39□□□□□ -0.27
COLCA2A8K830 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
COLCA2A8K830 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
COLCA2A8K830 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
COLCA2A8K830 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
COLCA2A8K830 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.39□□□□□ -0.27
COLCA2A8K830 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
COLCA2A8K830 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
COLCA2A8K830 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
COLCA2A8K830 AP005117.1-202ENST00000581724 1908 ntBASIC13.39□□□□□ -0.27
COLCA2A8K830 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
COLCA2A8K830 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
COLCA2A8K830 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
COLCA2A8K830 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COLCA2A8K830 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
COLCA2A8K830 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
COLCA2A8K830 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COLCA2A8K830 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COLCA2A8K830 AC007686.3-201ENST00000619017 3487 ntBASIC13.38□□□□□ -0.27
COLCA2A8K830 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COLCA2A8K830 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.38□□□□□ -0.27
COLCA2A8K830 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
COLCA2A8K830 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COLCA2A8K830 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
COLCA2A8K830 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COLCA2A8K830 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
COLCA2A8K830 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COLCA2A8K830 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
COLCA2A8K830 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.38□□□□□ -0.27
COLCA2A8K830 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
COLCA2A8K830 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
COLCA2A8K830 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.38□□□□□ -0.27
COLCA2A8K830 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
COLCA2A8K830 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
COLCA2A8K830 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
COLCA2A8K830 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COLCA2A8K830 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC13.38□□□□□ -0.27
COLCA2A8K830 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
COLCA2A8K830 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC13.38□□□□□ -0.27
COLCA2A8K830 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC13.38□□□□□ -0.27
COLCA2A8K830 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
COLCA2A8K830 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC13.38□□□□□ -0.27
COLCA2A8K830 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
COLCA2A8K830 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
COLCA2A8K830 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
COLCA2A8K830 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.38□□□□□ -0.27
COLCA2A8K830 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
COLCA2A8K830 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
COLCA2A8K830 AC063926.3-201ENST00000624734 5658 ntBASIC13.38□□□□□ -0.27
COLCA2A8K830 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms