Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L3A6NE82 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.27■□□□□ 0.04
MBD3L3A6NE82 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
MBD3L3A6NE82 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
MBD3L3A6NE82 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MBD3L3A6NE82 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC15.27■□□□□ 0.04
MBD3L3A6NE82 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
MBD3L3A6NE82 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MBD3L3A6NE82 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MBD3L3A6NE82 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.27■□□□□ 0.04
MBD3L3A6NE82 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.27■□□□□ 0.04
MBD3L3A6NE82 BCAR1-209ENST00000546196 1340 ntBASIC15.27■□□□□ 0.04
MBD3L3A6NE82 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
MBD3L3A6NE82 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MBD3L3A6NE82 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.27■□□□□ 0.04
MBD3L3A6NE82 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
MBD3L3A6NE82 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MBD3L3A6NE82 AC211486.1-202ENST00000416371 468 ntBASIC15.27■□□□□ 0.04
MBD3L3A6NE82 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.27■□□□□ 0.04
MBD3L3A6NE82 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
MBD3L3A6NE82 MKNK2P1-201ENST00000437526 628 ntBASIC15.27■□□□□ 0.04
MBD3L3A6NE82 AP006288.1-201ENST00000446065 395 ntBASIC15.27■□□□□ 0.04
MBD3L3A6NE82 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.27■□□□□ 0.04
MBD3L3A6NE82 CXCL1P1-201ENST00000502804 216 ntBASIC15.27■□□□□ 0.04
MBD3L3A6NE82 AC211476.1-201ENST00000503899 468 ntBASIC15.27■□□□□ 0.04
MBD3L3A6NE82 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.27■□□□□ 0.04
MBD3L3A6NE82 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
MBD3L3A6NE82 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.27■□□□□ 0.04
MBD3L3A6NE82 KRT19P2-202ENST00000557173 1012 ntBASIC15.27■□□□□ 0.04
MBD3L3A6NE82 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.27■□□□□ 0.04
MBD3L3A6NE82 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.27■□□□□ 0.04
MBD3L3A6NE82 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.27■□□□□ 0.04
MBD3L3A6NE82 AC133963.1-201ENST00000504166 1679 ntBASIC15.27■□□□□ 0.03
MBD3L3A6NE82 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MBD3L3A6NE82 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
MBD3L3A6NE82 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MBD3L3A6NE82 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.27■□□□□ 0.03
MBD3L3A6NE82 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
MBD3L3A6NE82 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MBD3L3A6NE82 AC012317.2-201ENST00000623305 2251 ntBASIC15.27■□□□□ 0.03
MBD3L3A6NE82 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
MBD3L3A6NE82 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.27■□□□□ 0.03
MBD3L3A6NE82 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.26■□□□□ 0.03
MBD3L3A6NE82 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MBD3L3A6NE82 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MBD3L3A6NE82 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MBD3L3A6NE82 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
MBD3L3A6NE82 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MBD3L3A6NE82 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.26■□□□□ 0.03
MBD3L3A6NE82 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
MBD3L3A6NE82 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MBD3L3A6NE82 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
MBD3L3A6NE82 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MBD3L3A6NE82 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MBD3L3A6NE82 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.26■□□□□ 0.03
MBD3L3A6NE82 ALG1L5P-201ENST00000482043 771 ntBASIC15.26■□□□□ 0.03
MBD3L3A6NE82 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.26■□□□□ 0.03
MBD3L3A6NE82 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.26■□□□□ 0.03
MBD3L3A6NE82 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
MBD3L3A6NE82 AC023141.13-201ENST00000604991 943 ntBASIC15.26■□□□□ 0.03
MBD3L3A6NE82 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MBD3L3A6NE82 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MBD3L3A6NE82 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MBD3L3A6NE82 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.26■□□□□ 0.03
MBD3L3A6NE82 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.26■□□□□ 0.03
MBD3L3A6NE82 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
MBD3L3A6NE82 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MBD3L3A6NE82 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MBD3L3A6NE82 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MBD3L3A6NE82 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MBD3L3A6NE82 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MBD3L3A6NE82 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MBD3L3A6NE82 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.25■□□□□ 0.03
MBD3L3A6NE82 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MBD3L3A6NE82 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.25■□□□□ 0.03
MBD3L3A6NE82 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MBD3L3A6NE82 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MBD3L3A6NE82 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
MBD3L3A6NE82 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.25■□□□□ 0.03
MBD3L3A6NE82 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
MBD3L3A6NE82 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MBD3L3A6NE82 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MBD3L3A6NE82 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MBD3L3A6NE82 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.25■□□□□ 0.03
MBD3L3A6NE82 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.25■□□□□ 0.03
MBD3L3A6NE82 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
MBD3L3A6NE82 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MBD3L3A6NE82 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
MBD3L3A6NE82 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MBD3L3A6NE82 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MBD3L3A6NE82 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MBD3L3A6NE82 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MBD3L3A6NE82 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
MBD3L3A6NE82 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
MBD3L3A6NE82 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
MBD3L3A6NE82 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
MBD3L3A6NE82 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.25■□□□□ 0.03
MBD3L3A6NE82 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.25■□□□□ 0.03
MBD3L3A6NE82 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.25■□□□□ 0.03
MBD3L3A6NE82 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms