Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 AC104819.1-201ENST00000504587 486 ntBASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 AC012313.1-201ENST00000593393 3059 ntBASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC162PA2VCL2 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 AC009053.2-201ENST00000563701 2365 ntBASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 MYCLP1-201ENST00000372451 1075 ntBASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 AC012615.1-201ENST00000565797 1299 ntBASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC162PA2VCL2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 AC099336.1-202ENST00000602961 463 ntBASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 INTS4P1-201ENST00000438455 1935 ntBASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC162PA2VCL2 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC162PA2VCL2 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC162PA2VCL2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC162PA2VCL2 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CCDC162PA2VCL2 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC162PA2VCL2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC162PA2VCL2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCDC162PA2VCL2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC162PA2VCL2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC162PA2VCL2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC162PA2VCL2 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC162PA2VCL2 AC111152.3-201ENST00000569699 673 ntBASIC17.47■□□□□ 0.39
CCDC162PA2VCL2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC162PA2VCL2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.47■□□□□ 0.39
CCDC162PA2VCL2 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC162PA2VCL2 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CCDC162PA2VCL2 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC162PA2VCL2 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms