Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 MYCLP1-201ENST00000372451 1075 ntBASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 AC002558.1-201ENST00000488906 803 ntBASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 STK19B-204ENST00000512515 211 ntBASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 IGHV3-65-201ENST00000523210 341 ntBASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1G3Q9Y6M4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 RPS15P9-201ENST00000494093 319 ntBASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1G3Q9Y6M4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CSNK1G3Q9Y6M4 HTR7P1-202ENST00000624664 4411 ntBASIC17.08■□□□□ 0.33
CSNK1G3Q9Y6M4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CSNK1G3Q9Y6M4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CSNK1G3Q9Y6M4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CSNK1G3Q9Y6M4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.08■□□□□ 0.33
CSNK1G3Q9Y6M4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CSNK1G3Q9Y6M4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CSNK1G3Q9Y6M4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CSNK1G3Q9Y6M4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CSNK1G3Q9Y6M4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CSNK1G3Q9Y6M4 AC002310.6-201ENST00000624451 1377 ntBASIC17.08■□□□□ 0.32
CSNK1G3Q9Y6M4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CSNK1G3Q9Y6M4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CSNK1G3Q9Y6M4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CSNK1G3Q9Y6M4 AC023274.1-201ENST00000418278 595 ntBASIC17.08■□□□□ 0.32
CSNK1G3Q9Y6M4 MCCD1P2-201ENST00000423228 335 ntBASIC17.08■□□□□ 0.32
CSNK1G3Q9Y6M4 VN2R19P-201ENST00000442399 1052 ntBASIC17.08■□□□□ 0.32
CSNK1G3Q9Y6M4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.08■□□□□ 0.32
CSNK1G3Q9Y6M4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.08■□□□□ 0.32
CSNK1G3Q9Y6M4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CSNK1G3Q9Y6M4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms