Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB2Q9Y5E7 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.14■□□□□ 0.65
PCDHB2Q9Y5E7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB2Q9Y5E7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB2Q9Y5E7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB2Q9Y5E7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB2Q9Y5E7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHB2Q9Y5E7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB2Q9Y5E7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB2Q9Y5E7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHB2Q9Y5E7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB2Q9Y5E7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.13■□□□□ 0.65
PCDHB2Q9Y5E7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDHB2Q9Y5E7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB2Q9Y5E7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.13■□□□□ 0.65
PCDHB2Q9Y5E7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHB2Q9Y5E7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHB2Q9Y5E7 AC034105.1-201ENST00000563488 319 ntBASIC19.13■□□□□ 0.65
PCDHB2Q9Y5E7 AC109462.3-201ENST00000573934 613 ntBASIC19.13■□□□□ 0.65
PCDHB2Q9Y5E7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB2Q9Y5E7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.13■□□□□ 0.65
PCDHB2Q9Y5E7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB2Q9Y5E7 GPALPP1-207ENST00000611650 899 ntBASIC19.13■□□□□ 0.65
PCDHB2Q9Y5E7 PMS2P7-201ENST00000506558 1336 ntBASIC19.13■□□□□ 0.65
PCDHB2Q9Y5E7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB2Q9Y5E7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHB2Q9Y5E7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB2Q9Y5E7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB2Q9Y5E7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB2Q9Y5E7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PCDHB2Q9Y5E7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDHB2Q9Y5E7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PCDHB2Q9Y5E7 AC026471.1-201ENST00000564629 3026 ntBASIC19.13■□□□□ 0.65
PCDHB2Q9Y5E7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PCDHB2Q9Y5E7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PCDHB2Q9Y5E7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB2Q9Y5E7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 LINC00896-202ENST00000609602 2128 ntBASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 AC006557.2-201ENST00000592985 1240 ntBASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 AL356488.2-201ENST00000602755 427 ntBASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB2Q9Y5E7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 AC090340.1-201ENST00000620778 4980 ntBASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 AC148477.5-201ENST00000625164 1645 ntBASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 LETM1P2-201ENST00000597330 2178 ntBASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 KLF4P1-201ENST00000412782 1185 ntBASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 KRT18P27-201ENST00000427733 1299 ntBASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 UNC93B6-202ENST00000528242 690 ntBASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 AC027601.4-201ENST00000611259 610 ntBASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms