Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLIP2Q9UDT6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLIP2Q9UDT6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.75■□□□□ 0.91
CLIP2Q9UDT6 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLIP2Q9UDT6 AC099398.1-201ENST00000567919 2776 ntBASIC20.75■□□□□ 0.91
CLIP2Q9UDT6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLIP2Q9UDT6 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLIP2Q9UDT6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLIP2Q9UDT6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.75■□□□□ 0.91
CLIP2Q9UDT6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLIP2Q9UDT6 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.75■□□□□ 0.91
CLIP2Q9UDT6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLIP2Q9UDT6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLIP2Q9UDT6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.75■□□□□ 0.91
CLIP2Q9UDT6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLIP2Q9UDT6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 AL022342.1-201ENST00000400363 863 ntBASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 AL590627.1-203ENST00000421194 1026 ntBASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 NKAPP1-205ENST00000585790 367 ntBASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 AL049840.3-201ENST00000602669 611 ntBASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 AC009053.2-201ENST00000563701 2365 ntBASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 AC009949.1-201ENST00000623048 1830 ntBASIC20.74■□□□□ 0.91
CLIP2Q9UDT6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLIP2Q9UDT6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CLIP2Q9UDT6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLIP2Q9UDT6 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.73■□□□□ 0.91
CLIP2Q9UDT6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CLIP2Q9UDT6 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLIP2Q9UDT6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CLIP2Q9UDT6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLIP2Q9UDT6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLIP2Q9UDT6 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.73■□□□□ 0.91
CLIP2Q9UDT6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLIP2Q9UDT6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLIP2Q9UDT6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.73■□□□□ 0.91
CLIP2Q9UDT6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CLIP2Q9UDT6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.73■□□□□ 0.91
CLIP2Q9UDT6 AD001527.2-201ENST00000622994 785 ntBASIC20.73■□□□□ 0.91
CLIP2Q9UDT6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLIP2Q9UDT6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CLIP2Q9UDT6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLIP2Q9UDT6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLIP2Q9UDT6 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLIP2Q9UDT6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CLIP2Q9UDT6 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CLIP2Q9UDT6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLIP2Q9UDT6 PMPCAP1-201ENST00000508114 1576 ntBASIC20.72■□□□□ 0.91
CLIP2Q9UDT6 AC106820.2-201ENST00000563775 3264 ntBASIC20.72■□□□□ 0.91
CLIP2Q9UDT6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CLIP2Q9UDT6 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLIP2Q9UDT6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLIP2Q9UDT6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLIP2Q9UDT6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLIP2Q9UDT6 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.72■□□□□ 0.91
CLIP2Q9UDT6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLIP2Q9UDT6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.72■□□□□ 0.91
CLIP2Q9UDT6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLIP2Q9UDT6 AC103564.2-201ENST00000432853 1299 ntBASIC20.72■□□□□ 0.91
CLIP2Q9UDT6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLIP2Q9UDT6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.72■□□□□ 0.91
CLIP2Q9UDT6 AC120114.3-201ENST00000611923 658 ntBASIC20.72■□□□□ 0.91
CLIP2Q9UDT6 BX640515.1-201ENST00000617215 977 ntBASIC20.72■□□□□ 0.91
CLIP2Q9UDT6 FAM215A-202ENST00000632077 792 ntBASIC20.72■□□□□ 0.91
CLIP2Q9UDT6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLIP2Q9UDT6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CLIP2Q9UDT6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.72■□□□□ 0.91
CLIP2Q9UDT6 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
CLIP2Q9UDT6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLIP2Q9UDT6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLIP2Q9UDT6 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.72■□□□□ 0.91
CLIP2Q9UDT6 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLIP2Q9UDT6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLIP2Q9UDT6 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms