Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 MIR574-201ENST00000385209 96 ntBASIC16.46■□□□□ 0.23
CTSFQ9UBX1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 PMS2P1-201ENST00000431037 1228 ntBASIC16.46■□□□□ 0.23
CTSFQ9UBX1 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 SIGLEC30P-201ENST00000455569 941 ntBASIC16.46■□□□□ 0.23
CTSFQ9UBX1 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 AC106730.1-201ENST00000566722 1090 ntBASIC16.46■□□□□ 0.23
CTSFQ9UBX1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 AC117500.6-201ENST00000624871 588 ntBASIC16.46■□□□□ 0.23
CTSFQ9UBX1 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 AC009336.1-201ENST00000608941 1553 ntBASIC16.46■□□□□ 0.23
CTSFQ9UBX1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTSFQ9UBX1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
CTSFQ9UBX1 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
CTSFQ9UBX1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CTSFQ9UBX1 AL390961.4-201ENST00000623958 2535 ntBASIC16.46■□□□□ 0.22
CTSFQ9UBX1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CTSFQ9UBX1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.46■□□□□ 0.22
CTSFQ9UBX1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CTSFQ9UBX1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.46■□□□□ 0.22
CTSFQ9UBX1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 KRT18P27-201ENST00000427733 1299 ntBASIC16.45■□□□□ 0.22
CTSFQ9UBX1 AC005104.2-201ENST00000427818 678 ntBASIC16.45■□□□□ 0.22
CTSFQ9UBX1 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 AC006557.2-201ENST00000592985 1240 ntBASIC16.45■□□□□ 0.22
CTSFQ9UBX1 AL589182.2-201ENST00000619332 1049 ntBASIC16.45■□□□□ 0.22
CTSFQ9UBX1 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTSFQ9UBX1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTSFQ9UBX1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTSFQ9UBX1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
CTSFQ9UBX1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTSFQ9UBX1 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTSFQ9UBX1 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTSFQ9UBX1 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CTSFQ9UBX1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTSFQ9UBX1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTSFQ9UBX1 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTSFQ9UBX1 MYCLP1-201ENST00000372451 1075 ntBASIC16.44■□□□□ 0.22
CTSFQ9UBX1 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTSFQ9UBX1 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CTSFQ9UBX1 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.44■□□□□ 0.22
CTSFQ9UBX1 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.44■□□□□ 0.22
CTSFQ9UBX1 RNA5SP415-201ENST00000517246 115 ntBASIC16.44■□□□□ 0.22
CTSFQ9UBX1 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CTSFQ9UBX1 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.44■□□□□ 0.22
CTSFQ9UBX1 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.44■□□□□ 0.22
CTSFQ9UBX1 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms