Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.43■□□□□ 0.54
CD248Q9HCU0 SAPCD2P3-201ENST00000455031 850 ntBASIC18.43■□□□□ 0.54
CD248Q9HCU0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.43■□□□□ 0.54
CD248Q9HCU0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.43■□□□□ 0.54
CD248Q9HCU0 RNA5SP419-201ENST00000515908 135 ntBASIC18.43■□□□□ 0.54
CD248Q9HCU0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.43■□□□□ 0.54
CD248Q9HCU0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CD248Q9HCU0 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD248Q9HCU0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD248Q9HCU0 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CD248Q9HCU0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
CD248Q9HCU0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CD248Q9HCU0 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CD248Q9HCU0 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD248Q9HCU0 HLA-A-201ENST00000376802 1334 ntBASIC18.43■□□□□ 0.54
CD248Q9HCU0 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CD248Q9HCU0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.43■□□□□ 0.54
CD248Q9HCU0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CD248Q9HCU0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.43■□□□□ 0.54
CD248Q9HCU0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD248Q9HCU0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CD248Q9HCU0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD248Q9HCU0 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.42■□□□□ 0.54
CD248Q9HCU0 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.42■□□□□ 0.54
CD248Q9HCU0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD248Q9HCU0 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CD248Q9HCU0 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD248Q9HCU0 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CD248Q9HCU0 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.42■□□□□ 0.54
CD248Q9HCU0 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD248Q9HCU0 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD248Q9HCU0 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CD248Q9HCU0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD248Q9HCU0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD248Q9HCU0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD248Q9HCU0 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD248Q9HCU0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD248Q9HCU0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CD248Q9HCU0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
CD248Q9HCU0 VENTXP7-201ENST00000475503 772 ntBASIC18.42■□□□□ 0.54
CD248Q9HCU0 AL662844.1-201ENST00000546340 181 ntBASIC18.42■□□□□ 0.54
CD248Q9HCU0 TP73-AS1-207ENST00000624167 988 ntBASIC18.42■□□□□ 0.54
CD248Q9HCU0 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD248Q9HCU0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.42■□□□□ 0.54
CD248Q9HCU0 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD248Q9HCU0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD248Q9HCU0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD248Q9HCU0 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD248Q9HCU0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD248Q9HCU0 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD248Q9HCU0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD248Q9HCU0 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD248Q9HCU0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.42■□□□□ 0.54
CD248Q9HCU0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD248Q9HCU0 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD248Q9HCU0 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD248Q9HCU0 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.42■□□□□ 0.54
CD248Q9HCU0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD248Q9HCU0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CD248Q9HCU0 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD248Q9HCU0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD248Q9HCU0 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CD248Q9HCU0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CD248Q9HCU0 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CD248Q9HCU0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.41■□□□□ 0.54
CD248Q9HCU0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD248Q9HCU0 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CD248Q9HCU0 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.41■□□□□ 0.54
CD248Q9HCU0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD248Q9HCU0 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CD248Q9HCU0 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
CD248Q9HCU0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CD248Q9HCU0 AL022342.1-201ENST00000400363 863 ntBASIC18.41■□□□□ 0.54
CD248Q9HCU0 NUS1P2-201ENST00000417358 873 ntBASIC18.41■□□□□ 0.54
CD248Q9HCU0 POM121L3P-201ENST00000419331 1163 ntBASIC18.41■□□□□ 0.54
CD248Q9HCU0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.41■□□□□ 0.54
CD248Q9HCU0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.41■□□□□ 0.54
CD248Q9HCU0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.41■□□□□ 0.54
CD248Q9HCU0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.41■□□□□ 0.54
CD248Q9HCU0 AC011840.4-201ENST00000578471 627 ntBASIC18.41■□□□□ 0.54
CD248Q9HCU0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.41■□□□□ 0.54
CD248Q9HCU0 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.41■□□□□ 0.54
CD248Q9HCU0 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD248Q9HCU0 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD248Q9HCU0 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD248Q9HCU0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.41■□□□□ 0.54
CD248Q9HCU0 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD248Q9HCU0 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.41■□□□□ 0.54
CD248Q9HCU0 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CD248Q9HCU0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CD248Q9HCU0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.41■□□□□ 0.54
CD248Q9HCU0 LINC00554-201ENST00000564841 3011 ntBASIC18.41■□□□□ 0.54
CD248Q9HCU0 SDHAP2-201ENST00000455183 2001 ntBASIC18.4■□□□□ 0.54
CD248Q9HCU0 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.4■□□□□ 0.54
CD248Q9HCU0 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CD248Q9HCU0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.4■□□□□ 0.54
CD248Q9HCU0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.4■□□□□ 0.54
CD248Q9HCU0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.4■□□□□ 0.54
CD248Q9HCU0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CD248Q9HCU0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms