Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 KRT16P4-201ENST00000453883 522 ntBASIC15.33■□□□□ 0.04
CDH20Q9HBT6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH20Q9HBT6 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.32■□□□□ 0.04
CDH20Q9HBT6 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH20Q9HBT6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH20Q9HBT6 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH20Q9HBT6 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH20Q9HBT6 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH20Q9HBT6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH20Q9HBT6 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH20Q9HBT6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH20Q9HBT6 RCN1P2-201ENST00000398357 915 ntBASIC15.32■□□□□ 0.04
CDH20Q9HBT6 AC103564.2-201ENST00000432853 1299 ntBASIC15.32■□□□□ 0.04
CDH20Q9HBT6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH20Q9HBT6 AC122714.2-201ENST00000502787 707 ntBASIC15.32■□□□□ 0.04
CDH20Q9HBT6 AL591684.3-201ENST00000605187 298 ntBASIC15.32■□□□□ 0.04
CDH20Q9HBT6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH20Q9HBT6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH20Q9HBT6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CDH20Q9HBT6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH20Q9HBT6 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH20Q9HBT6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH20Q9HBT6 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH20Q9HBT6 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH20Q9HBT6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH20Q9HBT6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH20Q9HBT6 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH20Q9HBT6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH20Q9HBT6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH20Q9HBT6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH20Q9HBT6 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH20Q9HBT6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH20Q9HBT6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH20Q9HBT6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 AC134043.2-201ENST00000624206 2238 ntBASIC15.31■□□□□ 0.04
CDH20Q9HBT6 AC068880.1-201ENST00000507289 2297 ntBASIC15.31■□□□□ 0.04
CDH20Q9HBT6 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 IGHV3-52-201ENST00000519770 353 ntBASIC15.31■□□□□ 0.04
CDH20Q9HBT6 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 AC091304.2-201ENST00000564639 760 ntBASIC15.31■□□□□ 0.04
CDH20Q9HBT6 AC111152.3-201ENST00000569699 673 ntBASIC15.31■□□□□ 0.04
CDH20Q9HBT6 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 AC012313.10-201ENST00000623509 926 ntBASIC15.31■□□□□ 0.04
CDH20Q9HBT6 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH20Q9HBT6 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms