Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC68Q9H2F9 IGHV3-41-201ENST00000613121 348 ntBASIC17.58■□□□□ 0.4
CCDC68Q9H2F9 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC68Q9H2F9 AL121956.5-201ENST00000625261 221 ntBASIC17.58■□□□□ 0.4
CCDC68Q9H2F9 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CCDC68Q9H2F9 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC68Q9H2F9 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC68Q9H2F9 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC68Q9H2F9 REXO1L11P-201ENST00000620964 1927 ntBASIC17.58■□□□□ 0.4
CCDC68Q9H2F9 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC68Q9H2F9 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC68Q9H2F9 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC68Q9H2F9 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC68Q9H2F9 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.58■□□□□ 0.4
CCDC68Q9H2F9 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC68Q9H2F9 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC68Q9H2F9 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCDC68Q9H2F9 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC68Q9H2F9 AL139384.1-201ENST00000612143 3047 ntBASIC17.57■□□□□ 0.4
CCDC68Q9H2F9 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCDC68Q9H2F9 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC68Q9H2F9 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC68Q9H2F9 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC68Q9H2F9 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC68Q9H2F9 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CCDC68Q9H2F9 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC68Q9H2F9 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.57■□□□□ 0.4
CCDC68Q9H2F9 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC68Q9H2F9 AC124864.1-201ENST00000623408 392 ntBASIC17.57■□□□□ 0.4
CCDC68Q9H2F9 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC68Q9H2F9 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
CCDC68Q9H2F9 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC68Q9H2F9 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC68Q9H2F9 AL023806.1-201ENST00000603994 1649 ntBASIC17.57■□□□□ 0.4
CCDC68Q9H2F9 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC68Q9H2F9 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC68Q9H2F9 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC68Q9H2F9 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC68Q9H2F9 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC68Q9H2F9 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC68Q9H2F9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CCDC68Q9H2F9 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC68Q9H2F9 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC68Q9H2F9 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC68Q9H2F9 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC68Q9H2F9 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC68Q9H2F9 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC68Q9H2F9 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC68Q9H2F9 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC68Q9H2F9 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC68Q9H2F9 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC68Q9H2F9 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC68Q9H2F9 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCDC68Q9H2F9 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC68Q9H2F9 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC68Q9H2F9 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC68Q9H2F9 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CCDC68Q9H2F9 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC68Q9H2F9 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 AC096633.1-201ENST00000422446 749 ntBASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 FAM210CP-201ENST00000445714 574 ntBASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 KRT8P26-201ENST00000534154 1276 ntBASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 AC011840.4-201ENST00000578471 627 ntBASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 NTF6B-201ENST00000591913 560 ntBASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 AL592071.1-201ENST00000611956 408 ntBASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC68Q9H2F9 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC68Q9H2F9 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms