Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 INGX-201ENST00000359239 846 ntBASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 LYSMD4-203ENST00000378904 2122 ntBASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
COMMD4Q9H0A8 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COMMD4Q9H0A8 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 LINC01311-201ENST00000565162 1445 ntBASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 AC005104.2-201ENST00000427818 678 ntBASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 AC009154.2-201ENST00000621177 724 ntBASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms